Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02965 ATGCTGAGAAAGAGGAGCAGGTCACAGCAGAAGGATCAGAACCAAATGGATTCAAATTCTGATCACTATTCTCATCAGTTCCTTGCTTTGGGGCAAAACAAAACTCAACAAAAGCATTCAATTTTCAACAATGTCCCATGTCTCTTTGTTGGTTTTGGTCCTAAAGGTCTTTTAGATGCTGATTCAGTTAGAAGCCCTACTTCTCCATTAGATTCTAGAGTTCTTTCAAATCTTGGGAACCATGTTAATATTAGGACCCCAAAATCATCATGTAATCAAAGGAGTTGGGATTGTTGCAAAGTAGGACTAAGCCTTATAGATTCATTGGAAGATTGTCCCAAGTTCAATGGGAAGATTCTAAGGTGTTCTGAGAGCAAGAACATTAGTGTTACTCCCAAGGCCTCAAATTGTGAAAAGGCCTATTTGGATTACTCCAATTTTGATTCATCATCATCAAAGTCATTGCCTAAAGATTTTTGTAAGGCTCCTCCTCCTTTCACAACACAAAAAATTGGATCTATTCTCCAAAAGGGTGGTAGTGAGTCTAGTGTTCTATTTGAGATTGGAGATAGTGGTTTAGACCATGAGATTTTTGGGAAAACAAGGTCATGTTCATTGGATTCTTGTAGTCCGTTGAAGACCCTTTATTCTGATTTGGTTAATTCGTGGAATACCGATCCAAACAAGGACGATTTTGCTTTGAAAGATGTGGTTGTGATGAACACAACCACCCAATTGAGCTCCCCTCCTCATTTTATTGGAGGAAGCAAGAACTACTCTAAAAACACACTTTCCATGTGCTCTTGTTCCAATGAATTCATAAAGTCTTTATCAGCTAATGAGATTGAAAACTCTGAGGACTACACATGTGTGATTTCGCGAGGCCCGAATCCCAAAACAACTCACATTTTTTGTGATTGCATCTTGGAGACTCATCATGACAACAACGATGAGTTCAAGAATCATCTTAAAAATGAAGAGATGGAAAAGGAGAAGGGAGTAGTATCCCTGCTACAAACTCCAATCCATTATCCCTCTAGTGAGTTCCTAAGTTTCTGCCACCATTGCAACAAGAAGCTTGAAGAGGGTAAAGATATTTACATGTATAGGGGTGAAAGAGCATTTTGCAGTCTAACATGCCGCGCCTTGGAGATCATGAATGACGAGGAGTTAGAGGAAGAATCAGATAATACTCCTTCTAAGAACCCTCCAAATCAAGAACATGGTGAGAAACTTTTTGAGACTGGAATCATCACATCTAATAGATAG 1269 0.3909 MLRKRSRSQQKDQNQMDSNSDHYSHQFLALGQNKTQQKHSIFNNVPCLFVGFGPKGLLDADSVRSPTSPLDSRVLSNLGNHVNIRTPKSSCNQRSWDCCKVGLSLIDSLEDCPKFNGKILRCSESKNISVTPKASNCEKAYLDYSNFDSSSSKSLPKDFCKAPPPFTTQKIGSILQKGGSESSVLFEIGDSGLDHEIFGKTRSCSLDSCSPLKTLYSDLVNSWNTDPNKDDFALKDVVVMNTTTQLSSPPHFIGGSKNYSKNTLSMCSCSNEFIKSLSANEIENSEDYTCVISRGPNPKTTHIFCDCILETHHDNNDEFKNHLKNEEMEKEKGVVSLLQTPIHYPSSEFLSFCHHCNKKLEEGKDIYMYRGERAFCSLTCRALEIMNDEELEEESDNTPSKNPPNQEHGEKLFETGIITSNR 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02965 422 MobiDBLite consensus disorder prediction 390 422 - -
Aip08g02965 422 PANTHER FCS-LIKE ZINC FINGER 11 1 415 IPR044585 -
Aip08g02965 422 MobiDBLite consensus disorder prediction 1 20 - -
Aip08g02965 422 PANTHER DUF581 FAMILY PROTEIN 1 415 - -
Aip08g02965 422 Coils Coil 309 329 - -
Aip08g02965 422 ProSiteProfiles Zinc finger FLZ-type profile. 348 392 IPR007650 -
Aip08g02965 422 Pfam zinc-finger of the FCS-type, C2-C2 344 390 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02965 Aip-Chr8 118155112 118159023 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02965 - - ahf:112771313 579.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g02965 08 118155112 118159023 Aip08g02965 08 118155112 118159023 ECH
Aip06g03291 06 129248839 129251465 Aip08g02965 08 118155112 118159023 PCT