Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02960 ATGAGGAACAACAACATACCTCGTAGTATACGCAACCCCAAAATCTTCGCGCTGGGTTATCCTTCGTTGATAAAGTTCATAGAATTGGCCTCTCTCCATGTCTACATAGCAACTCTTTCGCAGCTTGCTATCATGCGCTTGATGCTCAGAGATGCCATGCTCCGTAACAATGGCTTCAGCATCCTAGCCCTCCCTAGAAAGGTGAAGTACGCTGAGCTTGTGACTCAGGTGCCGATTCGCCGCCACTGCGAACACAAGTTTGCAAGGAAGGAGCGAACTGTTGCTGCATCAAAGACCAAAAACCTCTTCAGTTTATTTGAAGAGACTAGCGAATACCGGCAAGTTAAGGAACCTTGCGGGTATCACGAAAAGTTTGCCTTCTTGACCCACGTACACAAATATGAACCTCGAGGGGGCGCGTCACGGCGACAAAGCGGATGGCTTGGAATCAACAGAGGAGGAGTCGTAGTGGTAGTGGTGGTGGTGGTGGTGGTGGCTGATGGCCCCCCACCGCCTCTCCCTCCTCTCATTCTTCTCCCTCTCTGTTCTATGATAAATCGCAACGAAGAGAGAGAAAGAGAAATGACGAACGCAGAAGAACACAGTGGAGGCGAGGAGAATACGATGGAGGATGAGATTCTGAGGCTACGAGGACGATGGGAACTCGCTTCTGTTCTCAACTTCTTCGACGTGTTTAGCTCAATACTCGGCAAAGAATTCAAGCTTTCTGCTGAAGAGTTAGAAATTGGGATTGTCAAGCCTGACTCTGCACTTGCTCAGCTTCACATTCAACTTTTGAAGGGGATACCACCAGTGAATAAAAATTTGGTTAATTCTGACAAATGGGTGACTGCTCTTTGCAAGAAACTAGCTATGTGGTGGTCATGGGTTGCTGAGGGGAAGATTCCACTTGTGCCGTCTAACGGAGAGGAGATATCCAAATACAAGGAACTTACTCCACTGGATCGTTTGCGACTGCTAAAAGCACTATGTGAAGTTCGAGCTGAACAAAATGATGCAGTATCATACATTAATGATTCTTTAAAAGAAGGAACAGAACTTACCTCTTTTCGCAAAGTAGCCTTAGGAAGAGATGGAACTGACACTTCCATTTGGTATGATGCAAATGCAAAATGCAAGAGTCACAGATTGTATAGGGAAATAATCACATCAGACTCAAGTTCACAGAATGATGTCAATGGCTGTTTATCAATTCCCATCAATTTTCAATGGGAAACACTTGCCTCCAATCTGGAAGAATTTTCAAAAGCAGCTGAAACATTTTCATGTAGCAAATCTTCTGTTGAAGTTGCTATTAGTAAGAAACTTGAAAGTGATGTCATTCCTGTTCTTGAAAAGCTTAAAAAGAATGAAGAAAGAGCAGCAATACGAAAGCAACGACAGGAGATGCTATCAACTGATTTTCGGAATTATTGCTCAGGAAATACACGCTCTTGTCGCACTCGCAGGCCTGTTAATTACTCACTTGAAGCTTATGATCGTACCATGAAGGAAGCTATACAGTTAATAAATACAAGGAAAAGGTCTTCAGGCACTGAACGAGACAAAAACACAGGATCAGAAGATAAATCCAACAGCAAGGATGATTCATCAGAGAGTGATTCCAAACAGGATGTGGTTCCCATATCAGACAGTGATGATACTGGTTATGAACATGAGGATTGTGGTTACAGTGAGGAGCAAGATGATGATGCTGATAGTAGTGAGCTGGGAAATTCAGAAGCGCATTCAAGCCGTGCAGCTCCTTATACAAAGGAAGTGCATTCAAGCCACGCAGTTTCTTATCCAAGGGGAGTTCGCTACAGCAAGCGGTTAGCTGGAGTCCCTAGCCATACCCTTGCAGAAAGCAGAGGTTTGGTCTCAAAGCAAAGACTGAGACAGAGACCCACTCGAAATTCTGCCTTAGAATCTATTGTTATTCCAGATTCAGATGATGAAGAACAAGAGAATGAAGACATTTCGGAGTCCAATTAG 1995 0.4411 MRNNNIPRSIRNPKIFALGYPSLIKFIELASLHVYIATLSQLAIMRLMLRDAMLRNNGFSILALPRKVKYAELVTQVPIRRHCEHKFARKERTVAASKTKNLFSLFEETSEYRQVKEPCGYHEKFAFLTHVHKYEPRGGASRRQSGWLGINRGGVVVVVVVVVVVADGPPPPLPPLILLPLCSMINRNEEREREMTNAEEHSGGEENTMEDEILRLRGRWELASVLNFFDVFSSILGKEFKLSAEELEIGIVKPDSALAQLHIQLLKGIPPVNKNLVNSDKWVTALCKKLAMWWSWVAEGKIPLVPSNGEEISKYKELTPLDRLRLLKALCEVRAEQNDAVSYINDSLKEGTELTSFRKVALGRDGTDTSIWYDANAKCKSHRLYREIITSDSSSQNDVNGCLSIPINFQWETLASNLEEFSKAAETFSCSKSSVEVAISKKLESDVIPVLEKLKKNEERAAIRKQRQEMLSTDFRNYCSGNTRSCRTRRPVNYSLEAYDRTMKEAIQLINTRKRSSGTERDKNTGSEDKSNSKDDSSESDSKQDVVPISDSDDTGYEHEDCGYSEEQDDDADSSELGNSEAHSSRAAPYTKEVHSSHAVSYPRGVRYSKRLAGVPSHTLAESRGLVSKQRLRQRPTRNSALESIVIPDSDDEEQENEDISESN 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02960 664 Coils Coil 451 471 - -
Aip08g02960 664 MobiDBLite consensus disorder prediction 510 602 - -
Aip08g02960 664 MobiDBLite consensus disorder prediction 647 664 - -
Aip08g02960 664 PANTHER REMODELING AND SPACING FACTOR 1 213 591 IPR028938 GO:0006355|GO:0031213
Aip08g02960 664 MobiDBLite consensus disorder prediction 630 644 - -
Aip08g02960 664 MobiDBLite consensus disorder prediction 625 664 - -
Aip08g02960 664 MobiDBLite consensus disorder prediction 515 562 - -
Aip08g02960 664 PANTHER DDT DOMAIN-CONTAINING PROTEIN DDR4 213 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02960 Aip-Chr8 118038459 118049214 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02960 - - adu:107463013 886.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g02960 08 118038459 118049214 Aip08g02960 08 118038459 118049214 ECH