Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02942 ATGATGGTAGGGACAAAAAGACAATCATCATCATCATCATCACTAATAAAGAGATCAATTTGGATTATTGCATTCGTTTTTGTGTTGTCATTTTTTTTGGTTGTTGCCTACTATTATCAACCAAAACTAAAAGCAAGCCAAAAAGGATGCTATAGTACCCAAGGTTGTGGCACAAACACAAATGATGTTCAATTAATCAAAGTTGAAGATAATAAGGAAGAAGAAGTGGAACTAGTACCAAGGGAACTAACTGATGAAGAAATGGAATCTAGGGTTGTTGTTAAGGATATACTCAGGCTTCAAAATCTTCAACCCAAGAAGCCCAAGGTTGCCTTCATGTTCTTAACACAGGGTTCATTGCCTTTTGAGAAACTATGGCACATGTTTTTTAGTGGTCATGAAGGCAAATTCTCTGTTTATGTCCATGCTTCAAGGGAAACACCAATACATTTCAGTAATTATTTTATTGGTCGAGACATTCATAGTGAACCGGTAGCTTGGGGAAAATTTTCAATGGTTGAAGCAGAAAAAAGACTTTTGGGTAACGCACTTTTAGACCCTGATAACCAACATTTTGTCCTACTGTCAGAAAGCTGTGTACCTGTACGTCCCTTTCAATTTGTTTACAAATACTTATTGTTTTCAAATGTCAGCTTCCTTGACTGCTATCTTGATCTTGGTCCTCATGGAAATGGAAGATATATAGATTATATGATGCCTGAAGTGGAGGAGAAGGATTTTCGAAAAGGTTCACAGTGGTTCACAATGAAGCGACAGCATGCTCTAATAGTTATGGCAGACAACCTCTACCTTAGAAAATTTAGGGACCATTGCAGGCCAGGTATGGAAGGAGGACGCAACTGCTATTCTGATGAGCATTACTTTCCAACTTTTTTCCATATGATTGATCCAGGTGGAATTTCAAATTGGTCAGTTACCTATGTTGATTGGTCCGAAGGAAAATGGCATCCAAGGTCATTCACTGCTGAGGAAGTTAATAATAGATTCCTGGAAGCCTTAACATCCATTGATGTATGTCCACATATTACAAGTGATGAAAAGAGAACAATAAGGTTTACACCTTGCATGTGGAAAGGATCGAGACGACCATGTTATCTATTTGCTAGGAAATTTTTTCCTGAAACTCTTGATAATTTGGTGGCACTTTTCTCAAATTACTCAACATTATTATAG 1194 0.3735 MMVGTKRQSSSSSSLIKRSIWIIAFVFVLSFFLVVAYYYQPKLKASQKGCYSTQGCGTNTNDVQLIKVEDNKEEEVELVPRELTDEEMESRVVVKDILRLQNLQPKKPKVAFMFLTQGSLPFEKLWHMFFSGHEGKFSVYVHASRETPIHFSNYFIGRDIHSEPVAWGKFSMVEAEKRLLGNALLDPDNQHFVLLSESCVPVRPFQFVYKYLLFSNVSFLDCYLDLGPHGNGRYIDYMMPEVEEKDFRKGSQWFTMKRQHALIVMADNLYLRKFRDHCRPGMEGGRNCYSDEHYFPTFFHMIDPGGISNWSVTYVDWSEGKWHPRSFTAEEVNNRFLEALTSIDVCPHITSDEKRTIRFTPCMWKGSRRPCYLFARKFFPETLDNLVALFSNYSTLL 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02942 397 Pfam Core-2/I-Branching enzyme 110 340 IPR003406 GO:0016020|GO:0016757
Aip08g02942 397 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN 12 395 - -
Aip08g02942 397 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 12 395 IPR044174 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02942 Aip-Chr8 117817498 117824398 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02942 - - gmx:100306431 519.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g02942 08 117817498 117824398 Aip08g02942 08 117817498 117824398 ECH