Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02940 ATGGGTTTGAGAAACACATCTGTTCTGTGCTTGGCACTGTTTCTTGCTTTCTCTTCATGCATTCATGGGTTAGATATCACTAGCGCACTCAGCAAATACCCAGAATTCACCAAGTTCAGCAAGTACCTCACCGAAACCAAGCTTGTTGATCAAATCAACGGCCAGAAAGCCGTTACCGTCCTCGCCCTCGGCGACGACGCACTCGCCTCCCTTGACGGGAAGCCCCGGGACTACATCAAGGCAGTCCTGGCCAACCACGTGGTTACCAACTACTACGACGAGAAGCTTCTCGTCGGAGCAGTTGGTAGCCACGAGAAGTTGGCCACACTCTCATCTTCTGGAATCTTCGTCAACTTGATAAACGATGGCGAGGTGGCTTTTGCACCCGCCGAGAAAGAACAGTATGAGAGCAAGCTCGTCAGAACCGTTGAAACTCAACCCGAATCACTTTCAATCTTGGAGGTTCATCAGCCTATTTTTGCTCCATCCGCCGTTGCCAACGCCGTCGCAGCCACCGTGTCGTCGGAAGGGAAGAAGGTTCAAGAAGCAGCAGCCGGTGTTAGCGGCGGTTGTCGCGTCGAGATGGGGCTCTTTGGGGGAGTAGTTATTGCCTTGGTTTCGCTCTTTGCTTCATTGTAA 639 0.5211 MGLRNTSVLCLALFLAFSSCIHGLDITSALSKYPEFTKFSKYLTETKLVDQINGQKAVTVLALGDDALASLDGKPRDYIKAVLANHVVTNYYDEKLLVGAVGSHEKLATLSSSGIFVNLINDGEVAFAPAEKEQYESKLVRTVETQPESLSILEVHQPIFAPSAVANAVAATVSSEGKKVQEAAAGVSGGCRVEMGLFGGVVIALVSLFASL 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02940 212 ProSiteProfiles FAS1/BIgH3 domain profile. 23 144 IPR000782 -
Aip08g02940 212 SUPERFAMILY FAS1 domain 20 122 IPR036378 -
Aip08g02940 212 Pfam Fasciclin domain 34 120 IPR000782 -
Aip08g02940 212 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 176 IPR033254 -
Aip08g02940 212 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Aip08g02940 212 Gene3D FAS1 domain 24 174 IPR036378 -
Aip08g02940 212 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 1 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02940 Aip-Chr8 117792738 117793769 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02940 - - adu:107463005 383.645