Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02937 ATGGAAGGTTCTGGAAGCAGCGTTTCGGCGTCATCATCGGCAGCGATGGCGCAACAAACATGGGAGCTGGAAAACAACATAATACCCATGGACACACCACCTTCCGGCGCCGACGACTCCATCTTCTACTACGACGAGTCACTCCAAGGAGAGTACCAGCGCGAAAAGCCATGGTCCAACGACCCTCACTACTTCAAGCGCGTCAAGGTTTCCGCTCTCGCGTTACTCAAGATGGTTGTTCACGCGCGTTCTGGCGGCACCATCGAGGTCATGGGTCTCATGCAAGGCAAGATCGACGGTGACTCTATCATCGTCATGGATGCTTTTGCTTTGCCCGTTGAGGGAACCGAAACGCGTGTCAATGCCCAAGCTGATGCGTATGAGTACAGTGTTGAGTATGATCAGACCAACAAGCGTGCTGGGAGATTGGAAAATGTTGTTGGGTGGTATCACTCTCACCCTGGTTATGGGTGCTGGCTTTCTGGTATAGATGTGTCGACACAGATGCTCAATCAGCAGTTTCAGGAGCCCTTTCTGGCTGTTGTTATTGACCCCACTAGGACTGTTTCTGCTGGGAAAGTTGAGATTGGGGCCTTCAGGACATACCCTGAAGGGTATAAGCCTCCTGATGATCCTATTTCCGAGTACCAAACCATACCCCTCAATAAGATTGAAGACTTTGGTGTCCATTGTAAACAGTATTATTCGTTGGATATCACTTACTTTAAGTCTTCTCTTGATTCACACCTCTTGGATCTGCTATGGAACAAATATTGGGTGAATACGCTTTCTTCTTCCCCCCTATTGGGTAATGGGGACTATGTTGCTGGTCAAATCTCAGATTTAGCTGAAAAATTAGAACAAGCAGAGACTCAATTGGCGCATGCACGCTTTGGACCATTATTAGCACCTGCTCCGAGAAAGAAAGAAGAAGAGTCTCCGCTCGCTAAGATTACTCGTGATGGTGCAAAAATTACTGTGGAGCAAGTGCATGGACTAATGTCACAGGTAATCAAGGATATTCTATTCAACTCTGTTCAATCAAGTAGGTCTCGCACAGAAACATCTGGCCCTGAGCCCATGATTGAAAGTTGA 1095 0.4767 MEGSGSSVSASSSAAMAQQTWELENNIIPMDTPPSGADDSIFYYDESLQGEYQREKPWSNDPHYFKRVKVSALALLKMVVHARSGGTIEVMGLMQGKIDGDSIIVMDAFALPVEGTETRVNAQADAYEYSVEYDQTNKRAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDSHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAETQLAHARFGPLLAPAPRKKEEESPLAKITRDGAKITVEQVHGLMSQVIKDILFNSVQSSRSRTETSGPEPMIES 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02937 364 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED 31 351 - -
Aip08g02937 364 SMART pad1_6 67 204 IPR000555 GO:0005515|GO:0008233|GO:0008237
Aip08g02937 364 PANTHER BNAC07G13420D PROTEIN 31 351 IPR037740 GO:0004222|GO:0008180
Aip08g02937 364 Pfam Cop9 signalosome subunit 5 C-terminal domain 264 344 IPR040961 -
Aip08g02937 364 CDD MPN_RPN11_CSN5 57 329 - -
Aip08g02937 364 Gene3D Cytidine Deaminase, domain 2 9 270 - -
Aip08g02937 364 ProSiteProfiles MPN domain profile. 68 205 IPR037518 -
Aip08g02937 364 SUPERFAMILY JAB1/MPN domain 67 204 - -
Aip08g02937 364 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 65 176 IPR000555 GO:0005515|GO:0008233|GO:0008237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02937 Aip-Chr8 117742724 117746684 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02937 K09613 - gmx:100784909 652.514