Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02909 ATGGCTCCAAGATTGGATTTTCCCAATTGGTGGAGTAAGGACACACATGATAAAGGAACAACAACAACACCAGTGGTGGTGAAAATTGAGAATCCCACTTTCTCTGTTGTGGAGATTAATGGTGCAGATGCTGCATTCCGGCCGGTGGAGAAGAGCCGCGGCAAGAATGCGAAACAAGTCACATGGGTTCTGCTTCTCAAGGCTCACCGTGCCGTCGGCTGCATTGCTTGGCTTGCCAGTGTAATGTGGACATTGCTTGGAGCCATCAAGAAGAGGATAGTTCATGGACAGGGTGTTGCTATGGAGGGTGAGAGTGACAAGTTGGAGAGAGGGAAGTTGTTGTTTAGAGTCATTAGAGTGTTCTTGGTTGTTTCATTGGCTGTTCTTGCATTTGAGATTGTTGCTTACCTTCAAGGATGGCAATTCAGGAACCCAAATTTGCATATTCTTCCGAATGCCTTGGATTTCGAGGGGTTACTTCACATGGCGTATGTTGGTTGGCTGAGGTTTCGTGTTGAATACATCGCGCCGCCTGTACAAGCACTCTCGAAGTTCTGTGTTGTTTTGTTTCTTATCCAATCCGTGGACCGTATGGTTCTTTGCATGGGATGCTTTTGGATTAGATACAAGAAGGTTAAGCCAAGGTTTGCTGGGGATCCCTTCAAGGTTGATGATGTTGAAGGATCTGCAAGCCATTACCCTATGGTTCTGATTCAGATTCCAATGTGTAATGAGAGAGAGGTGTATGAGCAGTCTATTTCAGCGGTCTGCCAAATTGATTGGCCTAGGGATTGTTTACTGATTCAAGTACTCGATGATTCTGATGATGAAAGCATACAGTGCTTAATTAAGACCGAGGTCTCCAAATGGAGTCTAAAGGGAGTCAACATAATCTATAGGCATCGGTTAAACAGGACTGGATATAAAGCTGGGAATCTCAAATCTGCAATGAGCTGCGACTATGTGAAAGGCTACGAGTTTGTTGCAATTTTCGATGCAGACTTTCAACCAAATCCTGATTTTCTTAAACAAACTGTGCCACATTTCAAGGACAATCCTGAACTAGGTTTGGTCCAAGCTAGATGGTCTTTTGTGAACAAGGATGAGAACTTGTTGACTCGTCTCCAAAACATTAACTTATGCTTCCACTTCGAGGTAGAACAACAGGTCAATGGACTATTTCTCAATTTTTTTGGTTTTAATGGAACTGCTGGTGTTTGGAGGATCAAAGCCCTTGAAGAATCTGGAGGCTGGCTTGAGAGGACAACGGTAGAAGATATGGACATTGCGGTCCGAGCTCATCTCAATGGATGGAAGTTTATCTTCCTAAATGATGTTAAGGTGCTTTGTGAAGTTCCTGAGTCATATGAAGCTTATAGGAAGCAGCAACACCGTTGGCATTCAGGTCCTATGCAACTTTTTAGATTGTGCCTCCCTGCAATTGTTAGATCTAAGGTGTCAACATGGAAGAAAGCAAACTTAATACTCCTCTTTTTTCTTTTAAGGAAACTAATTCTTCCCCTTTATTCCTTCACCCTGTTCTGTATAATTCTTCCTTTAACCATGTTCGTGCCTGAGGCTGAGCTTCCGTTGTGGGTGATTTGCTATGTACCAGTTTTCATGTCATTCCTTAACATCCTCCCTGCCCCAAAATCTTTTCCTTTTATTGTTCCTTACCTTCTTTTTGAAAACACCATGTCCGTCACCAAATTCAATGCAATGGTATCTGGACTCTTCCAATTAGAAAGCTCTTATGAATGGATTGTGACAAAGAAGGCCGGAAGGTCATCTGATTCTGATTTGTTGGAAGCCGAACAAAGGGAAGCCAAGTCGATAGAGCATCAAAAGATCCATAAAGGAGCTTCTGAGAGCGAACTTGTCGAGTTACACCACTTTAAGGAACAAAAAGAATCTGCTCCAACACCTATCAAGAAAGCTAATAAGATTTACAAGAAAGAGTTGACTTTGGCATTCCTCCTCCTCACTGCTTCTGTCCGGAGTCTATTATCAGCACAAGGAGTTCACTTCTACTTTCTGCTTTTCCAAGGGGTGACCTTCCTCCTCGTCGGTCTCGACTTGATTGGAGAGCAAATGAGCTAG 2100 0.4319 MAPRLDFPNWWSKDTHDKGTTTTPVVVKIENPTFSVVEINGADAAFRPVEKSRGKNAKQVTWVLLLKAHRAVGCIAWLASVMWTLLGAIKKRIVHGQGVAMEGESDKLERGKLLFRVIRVFLVVSLAVLAFEIVAYLQGWQFRNPNLHILPNALDFEGLLHMAYVGWLRFRVEYIAPPVQALSKFCVVLFLIQSVDRMVLCMGCFWIRYKKVKPRFAGDPFKVDDVEGSASHYPMVLIQIPMCNEREVYEQSISAVCQIDWPRDCLLIQVLDDSDDESIQCLIKTEVSKWSLKGVNIIYRHRLNRTGYKAGNLKSAMSCDYVKGYEFVAIFDADFQPNPDFLKQTVPHFKDNPELGLVQARWSFVNKDENLLTRLQNINLCFHFEVEQQVNGLFLNFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKVLCEVPESYEAYRKQQHRWHSGPMQLFRLCLPAIVRSKVSTWKKANLILLFFLLRKLILPLYSFTLFCIILPLTMFVPEAELPLWVICYVPVFMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMVSGLFQLESSYEWIVTKKAGRSSDSDLLEAEQREAKSIEHQKIHKGASESELVELHHFKEQKESAPTPIKKANKIYKKELTLAFLLLTASVRSLLSAQGVHFYFLLFQGVTFLLVGLDLIGEQMS 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02909 699 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 226 453 IPR029044 -
Aip08g02909 699 Pfam Glycosyl transferase family group 2 328 533 IPR001173 -
Aip08g02909 699 PANTHER - 21 699 - -
Aip08g02909 699 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 5-RELATED 21 699 - -
Aip08g02909 699 SUPERFAMILY Nucleotide-diphospho-sugar transferases 233 515 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02909 Aip-Chr8 117179178 117183131 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02909 1 699 Miscellaneous Gene Families AT4G31590 78.317 0.0 1105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02909 - - gmx:100776577 1216.83