Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01789 ATGAAGGGAATACACCTTTCACCACCACCAACACAAACCACGAACACAATCCAATTGCAAACCTTTCCCACCACTACCACCAACCCCAACCAAGTTCAATTCCTCCCATTCCAAACAAAGCATAACAACAAGAAGAAAAAACCCAAGACACCAATCCTATGTCTCTCTTCGACAAACCCATCCAAAATCCACCCACAACCGCCGCTCGTGGTGGTCGGTTCCGCGAATGCCGACATCTACGTGGAGATCGACAGGCTCCCAAAGGAAGGCGAAACACTGCCAGCTAAGACTGGGCAGACCCTCGCGGGCGGGAAGGGCGCAAACCAGGCAGCTTGCGGAGGGAAGCTGTCCTACCCGACGTACTTCGTCGGGCAGGTCGGGCAGGACTCGTATGGGAAGCTTGTGACCGAGGCGCTGAGGAGTGGTGGAGTGTGTCTTGATCACGTGACGACGATTAGTGGTGGAACCCCAACTGGGCATGCTGTTGTGATGCTGCAGTCTGATGGGCAGAACTCCATAATTGTTGTTGGTGGTGCGAATATGAGCTGCTGGCCTGAGATTCTTCCTCAGCATGATCTTGATGTTGTTAGGAACGCTGGCATTGTCTTGCTCCAGAGGGAAATCCCTGATGCTGTCAACATTCAGGTCGCAAAGGCTGCAAGGAGTGCTGGTGTCCCAGTAATTTTTGACGCTGGGGGCATGGATTCTCCAATTCCACAAGAATTACTGAACTATGTTGATATTCTGAGCCCTAATGAAACTGAACTTGGTCGCCTTACAGGAATGGCAACTGAAAGCTTTGAAGATATTGCACAGGCTGCAGCTAAATGCCATAAATGGGGAGTTAAGCAAGTCCTTGTGAAACTCGGGGAGAAAGGATCAGCACTTTTTATTGAAGGAGAAGAACCAATTCAGCAACCTGCCATATTTGCTAAGAAGGTTCTTGATACCACTGGGGCTGGTGATACTTTTACAGCTGCTTTTGCTGTTGCATTAGTTGAGGGCAAATCCAAAAAGGAATGCCTCAAATTTGCCGCTGCCGCGGCTTCTCTTTGTGTTCAAGTGAAGGGGGCCATTCCCAGCATGCCTGATAGGAAATCTGTTCTGGAACTTCTTAACTATCATTGA 1128 0.4956 MKGIHLSPPPTQTTNTIQLQTFPTTTTNPNQVQFLPFQTKHNNKKKKPKTPILCLSSTNPSKIHPQPPLVVVGSANADIYVEIDRLPKEGETLPAKTGQTLAGGKGANQAACGGKLSYPTYFVGQVGQDSYGKLVTEALRSGGVCLDHVTTISGGTPTGHAVVMLQSDGQNSIIVVGGANMSCWPEILPQHDLDVVRNAGIVLLQREIPDAVNIQVAKAARSAGVPVIFDAGGMDSPIPQELLNYVDILSPNETELGRLTGMATESFEDIAQAAAKCHKWGVKQVLVKLGEKGSALFIEGEEPIQQPAIFAKKVLDTTGAGDTFTAAFAVALVEGKSKKECLKFAAAAASLCVQVKGAIPSMPDRKSVLELLNYH 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01789 375 PANTHER SUGAR KINASE 66 374 - -
Aip08g01789 375 CDD ribokinase 68 364 IPR011877 GO:0004747|GO:0006014
Aip08g01789 375 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 316 329 IPR002173 GO:0016773
Aip08g01789 375 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 103 127 IPR002173 GO:0016773
Aip08g01789 375 SUPERFAMILY Ribokinase-like 68 372 IPR029056 -
Aip08g01789 375 Pfam pfkB family carbohydrate kinase 69 364 IPR011611 -
Aip08g01789 375 Hamap Ribokinase [rbsK]. 67 370 IPR011877 GO:0004747|GO:0006014
Aip08g01789 375 Gene3D - 66 374 IPR029056 -
Aip08g01789 375 PRINTS Ribokinase signature 71 92 IPR002139 GO:0016301
Aip08g01789 375 PRINTS Ribokinase signature 98 117 IPR002139 GO:0016301
Aip08g01789 375 PRINTS Ribokinase signature 171 184 IPR002139 GO:0016301
Aip08g01789 375 PRINTS Ribokinase signature 241 256 IPR002139 GO:0016301
Aip08g01789 375 PRINTS Ribokinase signature 285 296 IPR002139 GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01789 Aip-Chr8 39019464 39022615 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01789 K00852 - fve:101295116 512.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01789 08 39019464 39022615 Aip08g01789 08 39019464 39022615 ECH