Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01772 ATGTTTTTGAATTGTAGACCTACATTTAGGAGAATTATCAGAAATGGATCAACTGAAATGTTCTCAGGATTGCCATATATTTACTCTCTCATGAACTGCTTGATCTGCATGTGGTATGGCACGCCTCTGATATCGCCCGATAATTTGTTGGTAACGACAGTTAATTCGATCGGAGCAGTATTTCAGTTTGTGTACATAATTATCTTCCTTGTGTATGCTGAGAAATCAAAAAAGGTGAGAATGTTTGGACTATTGCTGGCAGTTATCGGCGTTTTTGTGATCATTTTAGTTGGGAGCTTGCAAGTAACTGATAGTCAAACACGCCGAATCCTTGTTGGATTCTTGAGCTGTGCTTCCCTCATTTCAATGTTTGCCTCACCTTTGTTTATAATTAAATTGGTCATTCAGACAAAGAGTGTCGAATTCATGCCGTTTTATCTCTCGCTCTCCACCTTCCTAATGAGCACCTCCTTTTTGGTTTATGGATTGCTCAATGAGGATCCCTTCATTTATGTACCAAATGGGATAGGAACTGTTTTCGGAATCTTGCAGTTGGTATTATATTTCTATTACGAGAGTAAATCTAGAGAAGAATCCGGAGAACCTTTGATAGTGTCGTATGCTTTCTGCTGTCTTCTGTTTCTGGCAATCGGAACAAGAACAAGAATGCAAGCATCACTTGCATGCTATTCACGTCCACATGGAAACCCACTTGTCAAACTCAATCTCCAAACATCATCACACACCACCACCAACAGCTATAACCTCCTACCATCAATCACTTCACACACACCAATCTCTCTTCCCCTGAAACTCCAACCTCAGATTCTTTTGAGCCCTTCCCCTTTACTTCCCAAACCAAAATCAAACAGAACTTTGAGCTCCAAAGTTGGTCCACTTGGTTGCGGCATTTCGTCAAACGGGTACGGTGCAAGTGGGAAGAGGAGTTTGAGGGAGTGGGTTGAGTTATGCGGCGAGGCACTTTCAACTGCGTTTCCTTTGTGGGTGACGATTGGGTGCGTGTTGGGATTGGTGAGACCCAGTTCCTTCAATTGGGTCACTCCAAAATTAAGCATTGTGGGACTCACCATAATCATGCTTGGTATGGGTATGACTCTCACACTTGATGATCTTCGTGGTGCTCTTGCTATGCCCAAAGAAGTTCTCTCTGGTTTTCTGCTTCAATATTCGGTGATGCCATTATCTGGATTCTTTGTAAGCAAACTCTTAAACCTTCCATCACATTATGCAGCAGGTTTAATATTAGTTGGCTGCTGTCCTGGTGGCACAGCTAGCAATATTGTTACATATCTTGCACGTGGAAATGTGGCCCTCTCTGTGATAATGACAGCTGCAAGCACTTTATCTGCTGTGGTCATGACTCCTTTCTTGACAGCCAAACTTGCTGGTAAGTATGTAGCTGTGGATGCAGCTGGTTTGTTGACTTCAACATTGCAAGTTGTGCTCTTACCTGTATTGGCTGGTGCATTTCTGAATCAGTACTTCCAACCTCTTGTTAAGTTAGTTTCTCCTCTAATGCCACCCATGGCTGTAGCAACCGTTGCGATTTTATGCGGAAATGCAATTGCTCAGAGTTCTTCAGCTATCCTTATGTCCGGTGGACAAGTAGTTTTAGCCTGCATGCTTCTTCATGCTTCCGGTTTTTTCTTTGGATATGTACTTGCAAGAATGCTCAAGTTAGACGTGTCATCGTCACGAACCATATCAATCGAGGTTGGCATGCAGAACTCGGTGCTTGGAGTTGTTCTAGCTACTCAGCACTTTGGGGATCCCCTAACTACAGTACCATGTGCTGTTTCGAGTGTGTGTCACTCGATCTTCGGTAGTATTCTTGCTGGAATTTGGAGACGCTCGGTGCCAGCTGAGATGAAGGACTGA 1899 0.4339 MFLNCRPTFRRIIRNGSTEMFSGLPYIYSLMNCLICMWYGTPLISPDNLLVTTVNSIGAVFQFVYIIIFLVYAEKSKKVRMFGLLLAVIGVFVIILVGSLQVTDSQTRRILVGFLSCASLISMFASPLFIIKLVIQTKSVEFMPFYLSLSTFLMSTSFLVYGLLNEDPFIYVPNGIGTVFGILQLVLYFYYESKSREESGEPLIVSYAFCCLLFLAIGTRTRMQASLACYSRPHGNPLVKLNLQTSSHTTTNSYNLLPSITSHTPISLPLKLQPQILLSPSPLLPKPKSNRTLSSKVGPLGCGISSNGYGASGKRSLREWVELCGEALSTAFPLWVTIGCVLGLVRPSSFNWVTPKLSIVGLTIIMLGMGMTLTLDDLRGALAMPKEVLSGFLLQYSVMPLSGFFVSKLLNLPSHYAAGLILVGCCPGGTASNIVTYLARGNVALSVIMTAASTLSAVVMTPFLTAKLAGKYVAVDAAGLLTSTLQVVLLPVLAGAFLNQYFQPLVKLVSPLMPPMAVATVAILCGNAIAQSSSAILMSGGQVVLACMLLHASGFFFGYVLARMLKLDVSSSRTISIEVGMQNSVLGVVLATQHFGDPLTTVPCAVSSVCHSIFGSILAGIWRRSVPAEMKD 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01772 632 Pfam Sugar efflux transporter for intercellular exchange 1 76 IPR004316 GO:0016021
Aip08g01772 632 Pfam Sugar efflux transporter for intercellular exchange 111 195 IPR004316 GO:0016021
Aip08g01772 632 Gene3D - 110 197 - -
Aip08g01772 632 Gene3D - 1 78 - -
Aip08g01772 632 Pfam Sodium Bile acid symporter family 360 534 IPR002657 GO:0016020
Aip08g01772 632 Gene3D - 317 625 IPR038770 -
Aip08g01772 632 PANTHER SODIUM-BILE ACID COTRANSPORTER 277 632 IPR004710 -
Aip08g01772 632 PANTHER SODIUM/METABOLITE COTRANSPORTER BASS1, CHLOROPLASTIC-RELATED 277 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01772 Aip-Chr8 38316367 38395032 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01772 302 632 Organic Solute Cotransporters AT1G78560 78.852 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01772 K03453 - pvy:116112874 557.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01772 08 38316367 38395032 Aip08g01772 08 38316367 38395032 ECH