Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01600 ATGGCAAAGGGTAAAGCAACTTCAAAGCTCAACATCGCTATTATTCACCCTGATCTCGGCATAGGTGGAGCTGAAAGATTGATTGTGGATGCAGCTGTTGAGCTTGCATCCCATGGCCATAAAGTTCATATTTTTACTGCACACCATGATAAAAATCGATGCTTTGAGGAAACCAAACATGGGATTGGGAACTTCTTACCTAGTACCTTTCCAGTTACTGTGTATGGTTCCTTTCTTCCCCGGCATGTATTCTACCGTCTTCATGCATTGTGTGCTTTCCTCCGGTGCCTATTTGTTGCTTTCTGTATGCTTTTTATGTGGCCTTCGTTTGATGTTATAATTGCTGATCAGGTCTCCGTAGTCATTCCCATCTTGAAACTTAAAAGATCAGCAAAGATTGTATTCTATTGTCATTTTCCCGACTTGTTGCTGGCTCAACATACCACTTTCCTCCGGAAGTTGTATCGGACACCAATAGACTATGTAGAAGAAGTAACAACTGGAATGGCTGATTTGATACTTGTTAACAGCAACTTCACTGCTTCTACTTTTGCGAATACTTTTATACATCTCAATGCCAAAGGGATTCGACCAGCTGTTCTGTACCCAGCAGTTAATGTGGATCAGTTCAAAGAACCAAGTTCCTTTAAGCTGAACTTTCTTTCCATTAACCGCTTTGAAAGGAAAAAGAACATAGAATTAGCAATTTTAGCTTTTGCTATGCTTCATTCGCCTGAAGCTTCTTTGACTGTTGCAGGTGGCTTTGACATACGGTTGAAGGAGAATGTGGAATACTTAGAACAGCTTAAGGCTTTAGCTGAAAGAGAAGGTGTCTCTAATAGAATAAGATTCATCACCTCTTGCTCTACCACTGAAAGGAATGCCCTGCTCTCGGAATGCCTGTGTGTCATTTACACTCCAAAGTTATTATGTCGATTATGA 942 0.4076 MAKGKATSKLNIAIIHPDLGIGGAERLIVDAAVELASHGHKVHIFTAHHDKNRCFEETKHGIGNFLPSTFPVTVYGSFLPRHVFYRLHALCAFLRCLFVAFCMLFMWPSFDVIIADQVSVVIPILKLKRSAKIVFYCHFPDLLLAQHTTFLRKLYRTPIDYVEEVTTGMADLILVNSNFTASTFANTFIHLNAKGIRPAVLYPAVNVDQFKEPSSFKLNFLSINRFERKKNIELAILAFAMLHSPEASLTVAGGFDIRLKENVEYLEQLKALAEREGVSNRIRFITSCSTTERNALLSECLCVIYTPKLLCRL 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01600 313 Gene3D Glycogen Phosphorylase B; 219 309 - -
Aip08g01600 313 PANTHER ALPHA-1,3/1,6-MANNOSYLTRANSFERASE ALG2 6 308 IPR027054 GO:0004378|GO:0006486
Aip08g01600 313 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 11 306 - -
Aip08g01600 313 PANTHER ALPHA-1,3/1,6-MANNOSYLTRANSFERASE ALG2 6 308 - -
Aip08g01600 313 Pfam Glycosyltransferase Family 4 21 208 IPR028098 -
Aip08g01600 313 Gene3D Glycogen Phosphorylase B; 6 218 - -
Aip08g01600 313 Pfam Glycosyl transferases group 1 219 306 IPR001296 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01600 Aip-Chr8 28913998 28918210 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01600 1 307 Glycosyltransferase AT1G78800 75.641 3.09e-176 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01600 K03843 - gmx:100809168 519.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01600 08 28913998 28918210 Aip08g01600 08 28913998 28918210 ECH