Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01583 ATGGTTTCTTCTTTGCCATACCCCAAAACCTTCCTTCTTACACTTTTGTTCTTATCATTCTCTATAGTCAATGCTCTTGTTCCTAAAAATGAGACATTCAAGTATGTAAACTCAGGTGAGTTTGGCCCTTACATTGTAGAGTATGGTGCCAATTACCGAATGATAAGCATATTCTCCTCTCCTTTCCAAGTTGGTTTCTATAACACCACCCCAAATGCTTTTACCCTAGCGCTTCGCGTTGGCCTCCAGCGATCGGAGCAGCTTTTCCGATGGGTCTGGGAGGCCAACAGAGGCAACCCTGTCGGCGAGGGTGCCACTTTCGCCCTAGGAGCCGACGGGAACCTTGTGTTGGCCGAGGCCAACGGAAGAATTGCATGGCAAACCAACACAACCAACAAGGATGTTGTTGCCTTTAGGTTGCTACCAAATGGTAACATGGTGCTAATTGATTCCAAAGGCAAATTTGTTTGGCAAAGTTTTGATTACCCAACGGATACACTCTTAGTGGGCCAGTCTCTAAGGGCTCAAGGCCCATCAAAATTGGTTAGTAGGCTTTCAGAGAAGGAAAATGTTAATGGGCCCTATAGCTTTGTACTTCAGCCCAATGGGCTAGCCCTATACTACAAGAGCAAAAATTCTCCTAAGCCTATTATCTATGGCCTCCTTTCAACTAAAAATTTTTTCTTTTCCGAAAAAGGGTCATTGAAAAACGTGACACTTGTATCCGATCCAGAAAGTTTCAGCCTTGGATTTGACTACTATGTGGCAAATCCTTCTAGTAGTGGCACTAGGGTTATTGCTTTGCCGGTTAATAATAGCACATTGACATACCTTAGGCTTGAAATTGATGGCAACATTAGGTTATACACTTATTTCCTTGATGTGCGTGATGGGGTTTGGAAAGAGACATACACATTGTTTGATAGAGATTCTGATGAAGAAAGTGAGTGTCAATTGCCAAGTAGGTGTGGGAATTTAGGGTTATGTGAAAATAACCAATGTGTTGGTTGTCCTTTGGAGAATGGTATTTTTGGTTGGAGCAAAGATTGCATTGCTAAGAGTGTGACTTCATGCAAGGCTAGTGATTTCCACTACTATAAGATTGAAGGTGTTGAGCATTACATGACCAAGTACAATGTTGGGGATAAGGTAAGTGAGAGCAATTGTGGGAACAAGTGTACCAAGGATTGCAAGTGTGTTGGGTATTTCTATCATAGGGAGAATTCATTGTGTTGGATAGCTTATGATCTACAAACACTTACTAAAGTGGCAAATTCCACACATGTGGGGTATGTCAAGGTGCCTAATAGTTAA 1314 0.4216 MVSSLPYPKTFLLTLLFLSFSIVNALVPKNETFKYVNSGEFGPYIVEYGANYRMISIFSSPFQVGFYNTTPNAFTLALRVGLQRSEQLFRWVWEANRGNPVGEGATFALGADGNLVLAEANGRIAWQTNTTNKDVVAFRLLPNGNMVLIDSKGKFVWQSFDYPTDTLLVGQSLRAQGPSKLVSRLSEKENVNGPYSFVLQPNGLALYYKSKNSPKPIIYGLLSTKNFFFSEKGSLKNVTLVSDPESFSLGFDYYVANPSSSGTRVIALPVNNSTLTYLRLEIDGNIRLYTYFLDVRDGVWKETYTLFDRDSDEESECQLPSRCGNLGLCENNQCVGCPLENGIFGWSKDCIAKSVTSCKASDFHYYKIEGVEHYMTKYNVGDKVSESNCGNKCTKDCKCVGYFYHRENSLCWIAYDLQTLTKVANSTHVGYVKVPNS 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01583 437 Pfam D-mannose binding lectin 92 178 IPR001480 -
Aip08g01583 437 PANTHER CURCULIN-LIKE (MANNOSE-BINDING) LECTIN FAMILY PROTEIN-RELATED 10 436 - -
Aip08g01583 437 PANTHER - 10 436 - -
Aip08g01583 437 ProSiteProfiles PAN/Apple domain profile. 358 436 IPR003609 -
Aip08g01583 437 CDD PAN_AP_plant 357 435 - -
Aip08g01583 437 PIRSF SLG 3 437 IPR035446 -
Aip08g01583 437 CDD B_lectin 46 163 IPR001480 -
Aip08g01583 437 Gene3D - 53 161 IPR036426 -
Aip08g01583 437 SMART blect_4 46 163 IPR001480 -
Aip08g01583 437 ProSiteProfiles Bulb-type lectin domain profile. 43 161 IPR001480 -
Aip08g01583 437 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 210 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01583 Aip-Chr8 28184711 28186306 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01583 - - gmx:100804561 709.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01583 08 28184711 28186306 Aip08g01583 08 28184711 28186306 ECH