Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01580 ATGGGTGGTGATCGCGATGGTAATCCGAGAGTGACTCCTGAAGTGACAAGGGATGTTTGCTTACTAGCTAGAATGATGGCTGCTAATTTGTATTATTCCCAGATAGAAGATCTTATGTTTGAATTGTCTATGTGGCGCTGCAACGATGAGCTACGCGTTCGCGCGGACGAACTTCACGGATCATTCAAGAAAGATGAAGTTGCAAAACACTATATAGAATTTTGGAAAAAGATTCCGGCAAATGAACCGTATCGTGTGATACTGGGTGATGTGAGGGATAGACTGTACAAGACTCGGGAGCGGTCTCGCCATTTACTCGCTCAGGGTTACTCTGACATTCCAGAGGAAGCAACTTTCACCAATGTGGAGGAGTTCCTGGAGCCTCTTGAGCTATGTTACAGATCACTGTGTGCTTGTGGCGATCGCGCAATTGCTGACGGAACCCTTCTTGATTTCTTAAGACAAGTTTCCACCTTCGGACTGTCACTAGTAAGGCTTGACATCAGGCAAGAGTCGGACCGTCACACGGACGTGATGGATGCCATCACAAAGCATTTGGGAATCGGATCCTACCAGGAATGGTCGGAGGAGAAGAGACAAGAGTGGCTTCTAGAAGAATTAAGCGGGAAGCGACCGTTGTTTGGACCTGACCTTCCAACAACCGAAGAAATCAGAGACGTTCTGGACACATTTCATGTCATAGCAGAGCTTCCAGCAGATAACTTCGGAGCCTATATCATATCAATGGCAACCGCACCGTCCGATGTGCTGGCGGTTGAGCTTCTTCAACGCGAATGCCGGATCAGGCATCCGTTAAGAGTTGTCCCGTTGTTTGAGAAGCTCGCAGATCTCGAGGCTGCTCCGGCCGCCTTGGCTCGCTTGTTTTCGGTAGAATGGTATAGAAACAGGATCAATGGGAAGCAAGAAGTCATGATTGGGTACTCCGATTCCGGAAAAGATGCCGGAAGATTCTCTGCAGCATGGCAGCTGTATAAGGCTCAAGAGGATCTTATAAAGGTAGCCAAGAAGTATGGGGTCAAGCTAACAATGTTCCATGGTCGCGGCGGGACGGTTGGAAGAGGAGGCGGGCCTACTCACCTTGCTATCCTCTCCCAACCTCCGGACACTGTCCATGGATCACTTCGTGTCACGGTTCAGGGTGAAGTAATTGAGCAGTCATTCGGGGAGCAGCATTTGTGCTTCAGAACACTTCAAAGGTTCACTGCTGCCACCTTAGAGCACGGTATGAACGCCCCAATTGCACCGAAGCCAGAATGGCGTCAGCTTATGGATGAGATGGCCGTCATTGCCACAGAGGAGTACCGATCAATTGTGTTCAAGGAGCCACGATTCGTGGAATACTTTCGCCTAGCTACCCCGGAGTTAGAGTACGGAAGGATGAACATTGGAAGTAGACCAGCGAAGAGAAAGCCTAATGGAGGCATTGAAACTCTGCGTGCAATTCCTTGGATCTTTGCGTGGACGCAGACAAGGTTTCATCTTCCGGTATGGCTAGGCTTTGGATCTGCATTTAAACATGTTATTCAGAAAGATGTTAGAAATCTCAACATGCTACAAGAGATGTACAACAATTGGCCTTTCTTTAGAGTCACCATTGATTTAGTGGAAATGGTGTTCGCCAAGGGCGATCCAGGTATCGCTGCTCTGAATGATAGGCTTTTGGTTTCTAAAGATTTATGGCCCTTTGGGGAGCAGTTGAGGAACAAATATGAAGAAACTAAGAAACTCCTCCTTCAGGTGGCTGGACACAAGGATCTTCTAGAAGGTGACCCCTACTTGAAGCAAAGGCTCCGGCTGCGTGATTCCTACATCACTACCCTGAATGTTTTCCAAGCTTACACATTGAAACGCATCCGCGATCCGAACTACAACGTGAATGTGAGGCCACGCCCACGAATATCTAAAGAATCATTAGACATCAGCAAATCGGCCGACGAATTAGTCTCGCTGAACCCAACAAGTGAATATGCTCCGGGTTTGGAAGACACCCTCATCCTCACCATGAAGGGTATCGCTGCCGGAATGCAGAACACCGGTTAA 2061 0.4833 MGGDRDGNPRVTPEVTRDVCLLARMMAANLYYSQIEDLMFELSMWRCNDELRVRADELHGSFKKDEVAKHYIEFWKKIPANEPYRVILGDVRDRLYKTRERSRHLLAQGYSDIPEEATFTNVEEFLEPLELCYRSLCACGDRAIADGTLLDFLRQVSTFGLSLVRLDIRQESDRHTDVMDAITKHLGIGSYQEWSEEKRQEWLLEELSGKRPLFGPDLPTTEEIRDVLDTFHVIAELPADNFGAYIISMATAPSDVLAVELLQRECRIRHPLRVVPLFEKLADLEAAPAALARLFSVEWYRNRINGKQEVMIGYSDSGKDAGRFSAAWQLYKAQEDLIKVAKKYGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTVHGSLRVTVQGEVIEQSFGEQHLCFRTLQRFTAATLEHGMNAPIAPKPEWRQLMDEMAVIATEEYRSIVFKEPRFVEYFRLATPELEYGRMNIGSRPAKRKPNGGIETLRAIPWIFAWTQTRFHLPVWLGFGSAFKHVIQKDVRNLNMLQEMYNNWPFFRVTIDLVEMVFAKGDPGIAALNDRLLVSKDLWPFGEQLRNKYEETKKLLLQVAGHKDLLEGDPYLKQRLRLRDSYITTLNVFQAYTLKRIRDPNYNVNVRPRPRISKESLDISKSADELVSLNPTSEYAPGLEDTLILTMKGIAAGMQNTG 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01580 686 Pfam Phosphoenolpyruvate carboxylase 1 686 IPR021135 GO:0006099|GO:0008964|GO:0015977
Aip08g01580 686 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 310 322 IPR033129 -
Aip08g01580 686 PRINTS Phosphoenolpyruvate carboxylase signature 350 379 IPR021135 GO:0006099|GO:0008964|GO:0015977
Aip08g01580 686 PRINTS Phosphoenolpyruvate carboxylase signature 482 508 IPR021135 GO:0006099|GO:0008964|GO:0015977
Aip08g01580 686 PRINTS Phosphoenolpyruvate carboxylase signature 308 328 IPR021135 GO:0006099|GO:0008964|GO:0015977
Aip08g01580 686 PRINTS Phosphoenolpyruvate carboxylase signature 159 179 IPR021135 GO:0006099|GO:0008964|GO:0015977
Aip08g01580 686 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 1 686 - -
Aip08g01580 686 Gene3D Phosphoenolpyruvate/pyruvate domain 25 162 - -
Aip08g01580 686 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 1 686 IPR021135 GO:0006099|GO:0008964|GO:0015977
Aip08g01580 686 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 1 686 IPR015813 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01580 Aip-Chr8 28084947 28087790 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01580 K01595 - gmx:100805069 1256.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01580 08 28084947 28087790 Aip08g01580 08 28084947 28087790 ECH