Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01559 ATGGCATTGCGTCACTTACGAGTCCTCCCTCACCCACTCACTAACTTCACTGCTAAACTCTCCCCAAACCGTCCCAAACACCGCGTTTGCTTCTCACTCTCCGCGTCCCCAATAATGGCTTCCATCTCTCGAAAGGTACTAGTTCCGATTGCCGATGGCACCGAGCCTATGGAGGCCGTCATCACCGTCGACGTGCTGCGGCGCTCCGGTGCAGATGTCACCGTTGCATCCGCCGGAAATCAGCTCACCGTTCAAGCTCTCCACGGCGTTAAGATCGTAGCTGACGCTGTCGTCTCCGATGTTGCTGACACCACCTTCGACCTCGTCGCTCTACCAGGAGGTGTTCCAGGCGTTGATAATCTTAGAGAATGTGGAGTTCTGGAAAAGTTGGTGAAAAAGCATGTTGAGGATGGACGACTTTATGCTGCAGTATGTGCTGCTCCTGCTGCAGTACTTGGTCCATGGGGCTTGCTGAAGGGGGTGAAGGCAACTTGTTATCCCGCATTTATGGAAAAATTGGCATCATATACGACAACTGTTGAGTCAAGGGTGCAACTGGATGGCAAAGTTGTGACTAGTCGTGCGCCGGGCACGACCATGGAGTTTGGGGTTGCGCTGGTTGAGCAATTATATGGAAAACAGAAAGCTGATGAAGTTGCTGGTCCATTGGTCATGCGTTCTAATCACGGTGATGAATATGTTTTTGCGGAGCTAAACCCTGTGCAATGGACAACTGAAAATCCTCCCAAGGTTCTTGTACCAATTGCTAATGGCTCAGAGGAAATGGAAGCCGTGATCATCATTGATATACTGCGTAGAGCAAAGGCAAATGTTGTGGTAGCTTCTCTTGAGGACAAACTAGAGATTGTTGCATCACGTAACATCAAACTGGAGGCAGATATGCTCCTTGATGAGGCAGCTAAACTTTCATATGACCTTATTGTATTGCCAGGTGGACTTGGTGGTGCTCAAACTTTTGCAAAGTCAGAAACCTTAGTGAGCTTACTGAAAAAGCAGAGGGAAAACAGATATTATGGAGCAATTTGTGCGTCCCCAGTCTTAGTCTTGGAGCCTCATGGCTTACTGAAGGGGAAAAAAGCCACGGCATTTCCTGCCTTGTGCAACAAGTTATCAGATCCGAGTGAAGCCGAAAACAGGGTTGTAGTTGATGGCAATCTTGTTACCAGCAGAGGCCCAGGGACTTCTATAGAATTCGCATTAGCTATTGTGGAGAAGCTTTTTGGACGCAAGCTAGGACTAGAACTTGCAAAGACCATAGTGTTTACAAGCCCATAG 1296 0.4846 MALRHLRVLPHPLTNFTAKLSPNRPKHRVCFSLSASPIMASISRKVLVPIADGTEPMEAVITVDVLRRSGADVTVASAGNQLTVQALHGVKIVADAVVSDVADTTFDLVALPGGVPGVDNLRECGVLEKLVKKHVEDGRLYAAVCAAPAAVLGPWGLLKGVKATCYPAFMEKLASYTTTVESRVQLDGKVVTSRAPGTTMEFGVALVEQLYGKQKADEVAGPLVMRSNHGDEYVFAELNPVQWTTENPPKVLVPIANGSEEMEAVIIIDILRRAKANVVVASLEDKLEIVASRNIKLEADMLLDEAAKLSYDLIVLPGGLGGAQTFAKSETLVSLLKKQRENRYYGAICASPVLVLEPHGLLKGKKATAFPALCNKLSDPSEAENRVVVDGNLVTSRGPGTSIEFALAIVEKLFGRKLGLELAKTIVFTSP 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01559 431 Coils Coil 280 300 - -
Aip08g01559 431 CDD GATase1_DJ-1 251 413 - -
Aip08g01559 431 PANTHER PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED 40 426 - -
Aip08g01559 431 Pfam DJ-1/PfpI family 44 209 IPR002818 -
Aip08g01559 431 Pfam DJ-1/PfpI family 250 411 IPR002818 -
Aip08g01559 431 PANTHER BNAA06G01020D PROTEIN 40 426 - -
Aip08g01559 431 SUPERFAMILY Class I glutamine amidotransferase-like 248 428 IPR029062 -
Aip08g01559 431 Gene3D - 243 430 IPR029062 -
Aip08g01559 431 Gene3D - 40 236 IPR029062 -
Aip08g01559 431 TIGRFAM not_thiJ: DJ-1 family protein 250 423 IPR006287 -
Aip08g01559 431 TIGRFAM not_thiJ: DJ-1 family protein 45 221 IPR006287 -
Aip08g01559 431 SUPERFAMILY Class I glutamine amidotransferase-like 44 227 IPR029062 -
Aip08g01559 431 CDD GATase1_DJ-1 46 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01559 Aip-Chr8 26929513 26932745 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01559 K03152 - gmx:100803116 651.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01559 08 26929513 26932745 Aip08g01559 08 26929513 26932745 ECH