LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip08g01515	ATGGATGGCAATGTTTTATTCGATGAAGGCAACAACGAAGAAGCCAACAACAATAATAATGGCACTATCAGCAACTCCAAGGACCGGAAGAGGAGAGACTACATGCTTGATGATGATAGCCCCAAGGTGGCACGCCAAAAACTTGCCAAGAGGATCCTCTTGTCTTTGACTAACCCTTCTTATGTTCTGAGACTTGGTTCCAAACCTCTGAGGTTGGATTACTGCACAAGGTTGCGGTACCTGCTGAGGAAGCTTGTCAAGGAACATGACTGGGCCACTGCCAGTGGTGTTCTCAGTGCTTACTTAAAGGGAACAATGAACGACAAGTCTCCATTCAGGAATTGCCTCAAGTTCTCGGCTTTATTGGAGCTTCTTAAGCACGTGGAAAACTATCATATTAATCCAACAAGGATGAAGAACCTCTTTGATATTTGGTCGAAGAATATTGGATCAATGAAGAGTTGGCCAATAGAAAGCAGATATAGAGTTCATGTGGAGTTCATCTTATTCTGTCTTGTGCATGGCAATACTGGGGATGCATATCAGCTTGTCATAAGCCTTGAGCAAGAAAAAGTTGATCTTGATCCTGTGTCAAAGATAATTATGGGCTTGACATTCTATACGATGTGGTATTCTTCTATCCCCGAAGAATTTCAGTGGAAAGATTCAGACCAGGCTGACTTGCAAGATTACTCACGTATGGAGGGGCCTTCCATCAGCAATGAAGTTGGACAGTCAGAGTGGCATAATACAGTTGAATCCTTTCTGGCAAACTCCCAAAGCCATTGTGAATCAGACACCTCTGTTTTGAAGGATAAGCATATATCTAGGGATGTTGGGTTCAACAATGACGTGGGAGAGTCTATGGAGATTGATGTTGATCATAGAAGAAAAGCATCGCATCAGAACTTACAGCCAGAAGAAGGTTTTCGCTCTAAGTCCGAAGAAAATGAAGGAAGTAGAGACTCCTTTTCCAACCATGAAGGCCTTACACAAGATACCTTAAATGTTATTAGGCAACTTGATTTGTGGTTGTTTCCCTTGAATTTTCCTGATGATAATAGTTTTGAGGAGTTCATGTATGTGCACTCAAATCAGCAAAATGACCAGTATAAAAAGGCTGTGAAATATTTACAACTTGCTCTCGACTCAGCACCTTCAGTAACAGCAGCATTACTTCCATTGATACAACTGTTGTTGATTGGAGGTCGTGTTGAAGAAGCCCTAATTTTGATTGAGAAGGAGTGTACTAATTCACCATCTGTGCTCCCTGTAAGATTGAGGGCTGCGTTCTTGGAGTGTTCTGATCGAAACAACTCTGACTTGATTGTCACATGTTTTGAGGATATGCTAAAGAAGGATCCACAAGAAAGTTATCCCTTAGCAAAACTTATCAGAATGTACCAAAACGGTGACTATAGCCTTGAATCTTTGTTCGAAATGATTGTTTTACATTTAGATGCTACTAGTGCAGAATACAGTACGTGGAGGATGTTATCTTCATGTTTCTTTAAACTCTCTTACTACGAAGAAGATTGTATATCTGCAAACGATACTAATGAAGATGGAGATAGGCAACATTATTCCTTTAGAAAAACCCCAAAAGTGTTTACACAGGAAATGTCCGGAATGTCTTGGAGGTTTCGCTGTAGGAGCTGGCTACTAACACATTTCAGCCATAGACAGCTTAATTCAGATGTTGAAGGTGATTTGCAGCTACTCACATACAAAGCAGCATGCGCATCCTATATGTATGGGCAAGATTTCCACTATGTTTTAAAGGCTTATTTTGTATTAGAAAATGAAAATAATAAGGACTTATTGTTGATTTTGGGTGAGCACAGGCAAAATTCATTTGAATTTTATCAGCAATTTCAAAATAAACTGAAATTATAA	1896	0.3987	MDGNVLFDEGNNEEANNNNNGTISNSKDRKRRDYMLDDDSPKVARQKLAKRILLSLTNPSYVLRLGSKPLRLDYCTRLRYLLRKLVKEHDWATASGVLSAYLKGTMNDKSPFRNCLKFSALLELLKHVENYHINPTRMKNLFDIWSKNIGSMKSWPIESRYRVHVEFILFCLVHGNTGDAYQLVISLEQEKVDLDPVSKIIMGLTFYTMWYSSIPEEFQWKDSDQADLQDYSRMEGPSISNEVGQSEWHNTVESFLANSQSHCESDTSVLKDKHISRDVGFNNDVGESMEIDVDHRRKASHQNLQPEEGFRSKSEENEGSRDSFSNHEGLTQDTLNVIRQLDLWLFPLNFPDDNSFEEFMYVHSNQQNDQYKKAVKYLQLALDSAPSVTAALLPLIQLLLIGGRVEEALILIEKECTNSPSVLPVRLRAAFLECSDRNNSDLIVTCFEDMLKKDPQESYPLAKLIRMYQNGDYSLESLFEMIVLHLDATSAEYSTWRMLSSCFFKLSYYEEDCISANDTNEDGDRQHYSFRKTPKVFTQEMSGMSWRFRCRSWLLTHFSHRQLNSDVEGDLQLLTYKAACASYMYGQDFHYVLKAYFVLENENNKDLLLILGEHRQNSFEFYQQFQNKLKL	631

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip08g01515	631	MobiDBLite	consensus disorder prediction	295	328	-	-
	Aip08g01515	631	MobiDBLite	consensus disorder prediction	295	323	-	-
	Aip08g01515	631	Gene3D	Tetratricopeptide repeat domain	355	513	IPR011990	GO:0005515
	Aip08g01515	631	PANTHER	TAF RNA POLYMERASE I SUBUNIT A	16	628	-	-
	Aip08g01515	631	Pfam	TAF RNA Polymerase I subunit A	84	596	IPR039495	GO:0000120\|GO:0006360
	Aip08g01515	631	MobiDBLite	consensus disorder prediction	1	32	-	-
	Aip08g01515	631	SUPERFAMILY	TPR-like	366	469	IPR011990	GO:0005515
	Aip08g01515	631	MobiDBLite	consensus disorder prediction	10	24	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip08g01515	-		-	gmx:100819662	776.163

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aip08g01515	08	25959181	25972918	Aip08g01515	08	25959181	25972918	ECH