Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01473 ATGTTAGGAAGTAATAACAAAAGTTCCCATGGCACTGCAGCAACAACAACACCTCTCTTATTAGGTGATAGAGAAGAAGTAGAAGATGCACAGCAACAAGAACAACATGAAGAATGGTGGAAGAGAATCTTGGATATGGATGAGGCAAAGCATCAACTACTGTTTTCACTGCCCATGATTGTTACAAACTTGTTGTATTACTTAATCACTTTGGTTTCAGTAATGCTTGTTGGTCACCTTGGTGACCTTCAGCTTGCTGGTTCCACTCTTGCCAACTCATGGTTCAGTGTCACTGGTGTCTCTCTCATGGTTGGTTTGAGTGGGGCACTAGAAACACTATGTGGGCAAGGATTTGGTGCAAAAGAATATCAAATGCTGGGAATTTATCTACAATCTTCATGCATCATATCCTTTGTTTTCTCCATCATCATATCCATAATTTGGTTCTACACACAACATATCTTAGTACTACTTCACCAATCCCAAGACATATCAAAAACAGCAGCACTCTACATGAAGTTCTTTTTTCCAGGCTTATTTGCATATGGATTCTTGCAAAACATTCTTAGGTTTCTCCAAACACAATCTGTTGTGACACCATTGGTTATTCTCTCAGCTATCCCATTGTTGATCCACATTGGTATTGCATATACATTGGTTGAGAAGACAGGTTTGGGTTTTGTTGGTGCACCTATTTCAGCTTCAATTTCACTATGGATAGCTATTGTTTTGTTGGCTTTGTATGTTATGTATGGAAAGAACTTCAAGTTGACATGGGAAGGGTTTTCTACTCAATCTTTTCATTATGTATTCCCTAGCCTTAAACTTGCTCTGCCCTCTGCAGCAATGGTATGTTTGGAGTATTGGGCTTTTGAAGTCTTGGTTTTCTTAGCTGGAATAATGCCTGATTCAGAAATAACCACTTCCTTGATTGCAATATGTGCCAATACAGAATTCATTGCATACATGATAACTTATGGTCTCAGTGCTGCTGCAAGCACCCGAGTTTCGAACGAACTGGGAGCCGGCCACCCGGACCAGGCGATTCGCGCGATGAGAGTGACTCTCACTCTCTCAGTTCTGCTTGGTTTGTGCTTTGTTTTGGCACTTGTATTTGGTCATAATATATGGATTCAAATGTTCAGTAGCAGTTCTAAAATAAAGGAGGAGTTTGCTTCAATAACACCCTTACTAGCAATATCTATATTACTAGATGCTGTCCAAGGTGTCTTATCAGGGGTGATTAGAGGATGTGGTAGGCAGCACTTGGCTGCATATGTAAACCTTGTAACTTTTTATCTCATTGGTTTACCAATATCATGTCTCCTTGGATTTAAGACCAATTTGCAATTCAAGGGTTTATGGATAGGGTTGATTTGTGGGCTTGTTTGTCAAACTGGAGCACTATTATTTTTCACATGGCGTGCCAATTGGTCCAAACTCCATCTCTCTCTGGACAAAATTAGACACAATGATCAACCAATTGTTGTTTAA 1494 0.3983 MLGSNNKSSHGTAATTTPLLLGDREEVEDAQQQEQHEEWWKRILDMDEAKHQLLFSLPMIVTNLLYYLITLVSVMLVGHLGDLQLAGSTLANSWFSVTGVSLMVGLSGALETLCGQGFGAKEYQMLGIYLQSSCIISFVFSIIISIIWFYTQHILVLLHQSQDISKTAALYMKFFFPGLFAYGFLQNILRFLQTQSVVTPLVILSAIPLLIHIGIAYTLVEKTGLGFVGAPISASISLWIAIVLLALYVMYGKNFKLTWEGFSTQSFHYVFPSLKLALPSAAMVCLEYWAFEVLVFLAGIMPDSEITTSLIAICANTEFIAYMITYGLSAAASTRVSNELGAGHPDQAIRAMRVTLTLSVLLGLCFVLALVFGHNIWIQMFSSSSKIKEEFASITPLLAISILLDAVQGVLSGVIRGCGRQHLAAYVNLVTFYLIGLPISCLLGFKTNLQFKGLWIGLICGLVCQTGALLFFTWRANWSKLHLSLDKIRHNDQPIVV 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01473 497 PANTHER PROTEIN DETOXIFICATION 27 488 - -
Aip08g01473 497 MobiDBLite consensus disorder prediction 1 16 - -
Aip08g01473 497 MobiDBLite consensus disorder prediction 1 32 - -
Aip08g01473 497 CDD MATE_eukaryotic 48 480 IPR045069 GO:0042910|GO:1990961
Aip08g01473 497 TIGRFAM matE: MATE efflux family protein 58 455 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip08g01473 497 Pfam MatE 279 440 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip08g01473 497 Pfam MatE 58 218 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip08g01473 497 PANTHER MULTIDRUG RESISTANCE PROTEIN 27 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01473 Aip-Chr8 24438809 24443494 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01473 K03327 - gmx:100816310 729.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01473 08 24438809 24443494 Aip08g01473 08 24438809 24443494 ECH