Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01466 ATGGCGGCAGCACCTGCAGTAACTGCCCTGAACGGGTTGAAGGTGACGCAAGCATACCTGGAAGGGAAGGCAGTTAAGGAAACAAAAGTTCTCATGGCCGAACTCTGCCGCCAATTCTATACCCTCGGATGGGTCTCTGGGACAGGTGGCAGCATCGCCTTCAAGGTCCACGATGACTCCATCCCCAAGTCTCACCAACTCATACTCATGTCCCCTTCTGGTGTTCAGAAGGAAAGAATGGAACCGGAGGACATGTATGTATTGTCGCACAATGGATCAGTCTTGTCTGCCCCATCTGCCAAACCTTACCCACACAAGCCTCCCAAGTGTTCTGATTCTAGTCCAGTGTTCTTGAAGGCATATGAGTTACGTGATGCTGGGGCTGTTATTCACAGTCACGGGATAGAATCTTGTCTTGTAACAATGATCAATCCTCTATCAAAGGAATTTCGAATCACTCACATGGAAATGATAAAAGGAATCAAGGGACATGGTTATTATGATGAACTTGTGGTCCCCATAATTGAGAACACGGCCTATGAATATGAGCTCACAGATTCTCTAGCTAAAGCTATTGAAGCCTACCCAAAATCAACAGCAGTTCTTGTTCGCAACCATGGGGTATATGTTTGGGGAGATACATGGATCAGTGCTAAAACCCAGACTGAGTGTTATCACTACCTCTTTGATGCTGCTATAAAACTTCACCAAATGGGATTAGACTGGTCCGCTCCAAACCATGGTCCAATACAAAGTGCAAGAAGTAGTCTAAGGATTGTCGGGGAGTCAAACTTTTCAGTTAAGGCAAAGAAAGATAATGGTGATATTGATCCATTCCCACGTTGCATTGTTCTCGACATTGAAGGAACTACTACACCCATATCATTTGTTTCAGAAGTTCTCTTTCCATATGCCCGTGATAATGTTGGTAGGCATCTATCTCTGACATATGATACTCCCGATACTCAAAATGATATCAAGTTGCTTCGTTCACAGGTTGAAAGTGACCTTGAACAAGGGGTTCCAGGTGCAGTGCCTATCCCCTCTGATGATGCTGGAAAAGAGGAAGTCATTGCTGCTCTAGTTGCTAATGTGGATGCCATGATCAAAGCTGATAGAAAGATCACTGCCTTGAAAGAGTTGCAGGGTCATATATGGCGAACTGGTTATGAGAAGGACGAACTGGAGGGAATAGTTTATGATGATGTACCAGAAGCCCTAGAAAAATGGCACGCCTTGGGCATAAAGGAACAAAAAGGAGACACGTAG 1269 0.4492 MAAAPAVTALNGLKVTQAYLEGKAVKETKVLMAELCRQFYTLGWVSGTGGSIAFKVHDDSIPKSHQLILMSPSGVQKERMEPEDMYVLSHNGSVLSAPSAKPYPHKPPKCSDSSPVFLKAYELRDAGAVIHSHGIESCLVTMINPLSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYEYELTDSLAKAIEAYPKSTAVLVRNHGVYVWGDTWISAKTQTECYHYLFDAAIKLHQMGLDWSAPNHGPIQSARSSLRIVGESNFSVKAKKDNGDIDPFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGRHLSLTYDTPDTQNDIKLLRSQVESDLEQGVPGAVPIPSDDAGKEEVIAALVANVDAMIKADRKITALKELQGHIWRTGYEKDELEGIVYDDVPEALEKWHALGIKEQKGDT 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01466 422 Gene3D - 25 249 IPR036409 -
Aip08g01466 422 SUPERFAMILY HAD-like 281 416 IPR036412 -
Aip08g01466 422 SMART Aldolase_II_2 30 233 IPR001303 -
Aip08g01466 422 Pfam Class II Aldolase and Adducin N-terminal domain 32 232 IPR001303 -
Aip08g01466 422 TIGRFAM salvage_mtnB: methylthioribulose-1-phosphate dehydratase 32 237 IPR017714 GO:0005737|GO:0019509|GO:0046872
Aip08g01466 422 Gene3D - 294 393 - -
Aip08g01466 422 Hamap Methylthioribulose-1-phosphate dehydratase [APIP]. 17 241 IPR027514 GO:0005737|GO:0019509|GO:0046872
Aip08g01466 422 PANTHER BIFUNCTIONAL METHYLTHIORIBULOSE-1-PHOSPHATE DEHYDRATASE/ENOLASE-PHOSPHATASE E1-RELATED 9 416 - -
Aip08g01466 422 SUPERFAMILY AraD/HMP-PK domain-like 26 246 IPR036409 -
Aip08g01466 422 PANTHER METHYLTHIORIBULOSE-1-PHOSPHATE DEHYDRATASE 9 416 IPR017714 GO:0005737|GO:0019509|GO:0046872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01466 K16054 - gmx:100796209 730.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01466 08 24235589 24242651 Aip08g01466 08 24235589 24242651 ECH