Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01458 ATGGCTGCTGCCACTGCCAGTATCGTCGGAACTTCTTCATGGAGTCTTCGAAGAGCAGCAGCACAAGCTTTCGCACTCTCTCAATCCCATTTTCTCTGCGCTACCAATCCCTACTTCTCTTTCCCAAGGACCCTTTGCACTCTGCCTCTCTCTGTTTCTGCTTCTTCAGCTTCAGATGTAAGTCACACAGTGCAAGCTATAAAGGGAGATGTCGATGAGCTACTGAATGGAGTGGTAGAGAAAAGTGTAATAAAAGAAGTGAAGCATATTCTTGAGATGGCTAGACGTGCATCATTAAGACGAGAGATTCTCCATACAGATTTTCTAACACCTCCAGTGCTTAAAGAATCTATGAAAGTTTTGGAGAAATTAGCAGACGTGAAAGCAATTGCTCAAGGAGGTTACCCCCAGGCTGAACGTTGTCGAATTTCTGTTGGACATCCAGAAGAACTGACAAGCGATCCAGATATCATTTCGGCATTGAGTGTCTCTGGGAACTTTCGATTTGAATCTTGTTCTCATGGTGACTTCCTTGGCTCAATTCTTGGTACAGGAATTACTAGGGAGAAAGTTGGAGATATTATATTGCAGGGAGAACAGGGTGCTCAGATACTTGTCGTACCAGAGCTTGTTGAATTTCTAATGTCGTCATTGGATAAGGTTCGTAATGTTCCTGTAAGTTGCAGTAAGATACCATTAATTTCTCTTGATTACGAGCCACCAAGAACAATCACGTTTAAAACTATAGAAGCATCGCTCAGAGTTGATGCCTTGGCTAGTGCAGGTTTTAAGATTTCACGTTCCAAGCTAGTTGACTTGATCAGCAATGGTGATGTGCGTATAAACTGGACCCCTGTTACTACCAAAGGAACCACACTGAAAAGTGGAGACATTGTATCAGTTAGTGGAAGAGGTAGATTAAAGATTGGAGAAATTAACTCAACAAAGAAAGGGAAGTTTGCAGTGGAGCTTATTCGGTATTTATGA 987 0.4235 MAAATASIVGTSSWSLRRAAAQAFALSQSHFLCATNPYFSFPRTLCTLPLSVSASSASDVSHTVQAIKGDVDELLNGVVEKSVIKEVKHILEMARRASLRREILHTDFLTPPVLKESMKVLEKLADVKAIAQGGYPQAERCRISVGHPEELTSDPDIISALSVSGNFRFESCSHGDFLGSILGTGITREKVGDIILQGEQGAQILVVPELVEFLMSSLDKVRNVPVSCSKIPLISLDYEPPRTITFKTIEASLRVDALASAGFKISRSKLVDLISNGDVRINWTPVTTKGTTLKSGDIVSVSGRGRLKIGEINSTKKGKFAVELIRYL 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01458 328 CDD S4 254 308 - -
Aip08g01458 328 Pfam Putative RNA-binding domain in YlmH 159 233 IPR040591 -
Aip08g01458 328 ProSiteProfiles S4 RNA-binding domain profile. 253 313 - -
Aip08g01458 328 Gene3D - 243 304 IPR036986 GO:0003723
Aip08g01458 328 PANTHER RNA-BINDING PROTEIN YLMH-RELATED 61 328 - -
Aip08g01458 328 TIGRFAM PS_II_S4: photosystem II S4 domain protein 84 326 IPR017506 -
Aip08g01458 328 SUPERFAMILY Alpha-L RNA-binding motif 112 316 - -
Aip08g01458 328 SMART s4_6 253 310 IPR002942 GO:0003723
Aip08g01458 328 PANTHER RNA-BINDING PROTEIN YLMH-RELATED 61 328 - -
Aip08g01458 328 Pfam S4 domain 257 299 IPR002942 GO:0003723
Aip08g01458 328 Gene3D - 80 146 - -
Aip08g01458 328 Gene3D - 154 236 IPR012677 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01458 - - gmx:100793767 509.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01458 08 23972477 23978000 Aip08g01458 08 23972477 23978000 ECH