Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01417 ATGAGGGGTCCTTTGGGTGCAGTCATAGGAAGATACTCATCAAGTGATGGAACCACCCCAGTTGGTGGGATCATAAGGCACAACAGAAAATGCAGCGACATTGCTGTTCTTGTTATCTTCATAGCATTCTGGATTTCCATGATTGTAAACTCTAGCTTTGGTTTCAACCAAGGCAACCCTTTGAGGCTTACTTATGGGCTGGATTACAAAGGAAATGTGTGTGGGGACAAGCATGCAGGGCTTCATGAAGTTGAGCTATTGTACTGGCTAAATCCTAATCAGGTATATCAAAGTGGATTGAAGGATAGCAAGCTAAAACTGGTCGACGCTCGCAGCATATGCTTGTTGGACTGCCCTGTACCTTCTGAAGATTCACTTAATTGGGTGTGTGATTATCCCGAAGGAGACATTCGTCTTAGTATGGATGATTGGATTGATAGCAACTATAATTATTATGAGTACCTTACACCGGAAATGAGAAACTCCTCTCTTCAACTTCAGGGCCCCTGTTATCCTGTCATATTTCCTAGTGTAAATGTTTACTGGACTTGCCAATTCATTGCTCGTGCATCAAATGTGTCATTAAACCATTGGCAGCAGATGGGTGGAGTTAGCATCAATGAAGACATTGTTATTGATAAGTCTATTCACAAGTATATCAACTCTCGGTCAGCCGTCTTAAAGAGATACATGGCTGACATAGGAAAGTCATGGCCTGTGCTGATTGTTTGTGGGGGGATTATACCTCTTTTTCTATCCGTGATTTGGCTGCTGATGATTCGGTATTTTGTCACTGCAATGCCTTGGGTGACAGTGGTTTTCTTTAATCTCCTAATGGTATCAGTCACAATGTTCTACTACCTGAAAGTTGGATGGATAGGAAATAATGCTATTTCCCCCATCATTGGCGAGCATGATCCTTACATTCATGTATCTGGGAGGGAGCTGACTCATCTACGCATTGGCACTATAATGATGACATTTATAACAATTGTTGCAATTCTGACATCAATTGCTATTGTCCGACGCATCCTTATGGGAACTTCTGTCCTTAAGGTTGCTGCAAAAGTGATAGGAGAAGTTCGAGCGCTCATCACTTTTCCAGTCATACCGTATTGTATTCTTGCAGTGTTCTACATGTTCTGGATTTCTGCTGCTCTCCATTTGTTCAGCTCTGGTCAGGTTGTTCAAAACAACTGTAATTCTAATTGCTGCGCATATGATCTCCTTGAGAAAAAGGTGAACTGTGATCGTTGTTGCGGATATAGCATTCGTTACACACCACATATTGGAATCGCCATCCTTTTTCATCTATTTGGGTGTTACTGGGCCACACAATTCTTCATAGCATGCTCATCAACAGTGATTGCTGGATCTGTTGCCTCTTATTATTGGGCACGTGGTGAAAATTCTCAAGAAATCCCTCTTCTTTCAGTCATTTCCTCCATGAAGAGGCTTATGCGTTACAATCTGGGTTCTGTGGCTCTTGGCTCTCTGACTGTATCATTTGTAGAGTCGATCCGCCTTTTGCTTGAATCCATGCGTCGCAAACTAAAAGTCTCCAGTTATGAGCCTGACAACTGGATTGGCAAGGCTGCATACCGATCTTCTCAATTTTTTCTAAGGTGTATTGGATGGATCATCAAATCAGTGAATCGAAATGCATACATAATCATTGCTATAACAGGTGAAAGTTTCTTCAGATCTTCTGCTATTGCAACAGAATTGATTATGAATAACATCCTGCGGATCGGACGTGTCAATGTGATTGGAGATGTTATTTTGTTCCTTGGAAAACTATGTGTTAGTCTCTCAAGTGCTGTTTTTGCATTCCTCATGTTGGATACACACAAGTATAGAGCTGCACATAACAAGATCACATCCCCACTCTTGCCTGTTCTGGTTTGCTGGGTTCTTGGGTACATTGTTGCAACGCTTTTCTTTGGAGTTGTCGAGATGTCAATTGATACCATCATTCTCTCATACTGCCAGGATTCAGAAGAGAATGGAACAGCACAGTATGCTCCACCCCTTCTCATGGAAACTCTCAACAATGACCAAAATGAGACGCAAAGGCTTACACAAGGATCCCAATGA 2097 0.4201 MRGPLGAVIGRYSSSDGTTPVGGIIRHNRKCSDIAVLVIFIAFWISMIVNSSFGFNQGNPLRLTYGLDYKGNVCGDKHAGLHEVELLYWLNPNQVYQSGLKDSKLKLVDARSICLLDCPVPSEDSLNWVCDYPEGDIRLSMDDWIDSNYNYYEYLTPEMRNSSLQLQGPCYPVIFPSVNVYWTCQFIARASNVSLNHWQQMGGVSINEDIVIDKSIHKYINSRSAVLKRYMADIGKSWPVLIVCGGIIPLFLSVIWLLMIRYFVTAMPWVTVVFFNLLMVSVTMFYYLKVGWIGNNAISPIIGEHDPYIHVSGRELTHLRIGTIMMTFITIVAILTSIAIVRRILMGTSVLKVAAKVIGEVRALITFPVIPYCILAVFYMFWISAALHLFSSGQVVQNNCNSNCCAYDLLEKKVNCDRCCGYSIRYTPHIGIAILFHLFGCYWATQFFIACSSTVIAGSVASYYWARGENSQEIPLLSVISSMKRLMRYNLGSVALGSLTVSFVESIRLLLESMRRKLKVSSYEPDNWIGKAAYRSSQFFLRCIGWIIKSVNRNAYIIIAITGESFFRSSAIATELIMNNILRIGRVNVIGDVILFLGKLCVSLSSAVFAFLMLDTHKYRAAHNKITSPLLPVLVCWVLGYIVATLFFGVVEMSIDTIILSYCQDSEENGTAQYAPPLLMETLNNDQNETQRLTQGSQ 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01417 698 Pfam Plasma-membrane choline transporter 324 667 IPR007603 GO:0022857|GO:0055085
Aip08g01417 698 PANTHER PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN 3 695 - -
Aip08g01417 698 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 3 695 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01417 Aip-Chr8 23062158 23066910 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01417 K15377 - gmx:100789185 1204.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01417 08 23062158 23066910 Aip08g01417 08 23062158 23066910 ECH