Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01400 ATGGCAGTGAGCTTTCTGCAGGAACGCGAGGTATCCGACCTCTGCCTTGGGAAACCACCGTTGAGGTCCCTCTCTGCTTCCTCCACCATCGCACACGCCTTGGCTGCTCTCAACAACTCGGAAGACAACTTCATCAGTGTCTGGACCTGTGATCATCGCAGCAAGAAGGAAGAAGAAGGAGAAGAAGAAGGAGGAGAGTGCTGTAGATGCGTTGGCAAAGTGTGCATGGTTGATGTTGTTTGCTTCCTTTCCAGGGAAGACAACCTCTTGTCTCCCTCTCAAGCTCTCAAAGCTCCTCTTTCTGTTATTCTCACTCAAGCTCCGCCTCGGATCGTCGTGCATCTAGAACCTTCTTCCACTTTACTGGAAGCAATTGATCTGATTCTCCAAGGAGCACAGAATCTTGTGGTGCCGATTATAGCAGCAACAAGAAAGAGTGGAATCTCAAGAAGAAAACAGATTCAGATTCAGAAATCATTGTCAACAAGCCACAATGGGCGTGAATTCTGCTGGATAACGCAAGAAGATGTGATTAGATTCCTACTTGGCTCCATTGGCCTCTTCACCCCTCTCCCTGCACTCTCTATTGACTCCCTCGGCATCATTTCCACCGATGTTCTTGCCATTGACTACTACTCCCCTGCATCCTTGGCGTTACCGGCGATTTCCAAGTCTCTGGCGGATCAAACTTCTGTTGCCATTGTTGATAGTGATGGCACCTTCATTGGCGAGATTTCGCCCTCTACTCTTGGTTGTTGTGACGAGACGGTTGCGGCCGCCATCGCCACTCTCTCTGCCGGGGACCTGATGGCCTACATTGATGGCGGTGGGCCCCCGGAGGATCTTCTCAGAGTGGTGAAGGCGAGGTTGAGAGAGAAGAATTTGGAGAAAATGCTTCAAGAGTTCATGATTTTGTCGCCTTTAGCTAGCGACGCTTCGTCGGCCTCGTCTGCATCATCGTCTGACGAGGAGTCCTCGTCGGCCAGAATACGGATGAGGCCCGGCGGAAGGTACTCTAGATCTTCGAGCTACTCGGCGAGGATGGTGAGGAAGGCTGAGGCCATAGTGTGCCATCCAAAGAGCTCACTTATTGCTGTGATGATTCAAGCAATTGCTCATAGAGTGAACTATTTGTGGGTTATTGAAGATGATTGCAGCTTAGTTGGCATTGTAACATTCTCAAATATGTTGAAAGTTTTCAGAGAACATTTAGAGACTATGTAA 1224 0.4935 MAVSFLQEREVSDLCLGKPPLRSLSASSTIAHALAALNNSEDNFISVWTCDHRSKKEEEGEEEGGECCRCVGKVCMVDVVCFLSREDNLLSPSQALKAPLSVILTQAPPRIVVHLEPSSTLLEAIDLILQGAQNLVVPIIAATRKSGISRRKQIQIQKSLSTSHNGREFCWITQEDVIRFLLGSIGLFTPLPALSIDSLGIISTDVLAIDYYSPASLALPAISKSLADQTSVAIVDSDGTFIGEISPSTLGCCDETVAAAIATLSAGDLMAYIDGGGPPEDLLRVVKARLREKNLEKMLQEFMILSPLASDASSASSASSSDEESSSARIRMRPGGRYSRSSSYSARMVRKAEAIVCHPKSSLIAVMIQAIAHRVNYLWVIEDDCSLVGIVTFSNMLKVFREHLETM 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01400 407 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 6 407 - -
Aip08g01400 407 ProSiteProfiles CBS domain profile. 348 406 IPR000644 -
Aip08g01400 407 PANTHER CYSTATHIONINE BETA-SYNTHASE (CBS) FAMILY PROTEIN-RELATED 6 407 - -
Aip08g01400 407 Gene3D - 328 402 IPR046342 -
Aip08g01400 407 Pfam CBS domain 353 399 IPR000644 -
Aip08g01400 407 SUPERFAMILY CBS-domain pair 191 405 IPR046342 -
Aip08g01400 407 MobiDBLite consensus disorder prediction 312 340 - -
Aip08g01400 407 Coils Coil 397 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01400 Aip-Chr8 22663101 22664919 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01400 - - adu:107462620 726.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01400 08 22663101 22664919 Aip08g01400 08 22663101 22664919 ECH