Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01376 ATGCAACGTGTTATGGCAGCGAACTTGTTGCAACGCAGATTCTTTACCCGACAAAGGCAAATATATGAAATGACAAACATGGCGGCAGCAACAATAACAACAACAAGAAAGCGAGTAACGGAGCCATGTGACGTGTTCCTGAACCATAGGTGCAGGGACACGAAGAAAACAGTGGCTTCGTTACTCTACGATCACCTAAGGAGGAACGGCTTCAACCCTTTCTTGGACAACAAAAACATGAAGCCAGGGGACAAACTCTTTGATAAGATAAATAGAGGAGTTCTCGAATGCAAGATCGGTGTTGCCGTCTTCTCCCCTCGTTATTGTGAATCATACTTTTGCCTACACGAGCTAGCGCTTCTAATGGAGTGTAGGAAGAAGGTGATACCCATCTTCTGCGATGTGAAACCTTCTCAGCTTCGTGTTCTTAACAATGGCAAATGGTCCCATGAAGATTTTCGCAGGTTTCGTTGGGCTCTTGACGAGGCCAAACATATTGTTGGACTCACCTACAATTCCTCAAAAGGGAAGCCTGCCCCCAAGCCTAGCCTCCACCACTGCCTTGTGCCTCTATTGCCGCCGCGCCGTCCGTCGCACCGACCCCTGTTCGCTTTCAGACTCATCAGTCGCTGGCACGCTGTTTCTTTCTCGAGCGTCCGTCGTCTTCCTCTTCCCCTGTCATTGCCGTTGCTCACCTTCCTCCTCGCCGCCGATAAAGCAGATTTAGCTGAAGAGAAGAAGCAGGGGAGCACCATTTTGGAGTCAGGGCCAGCAGAAGTAGCGCCAATCGAAGCTCATGGAGTAAGACCTAAGAACGGGACCAGAAGAAGTAGGGGGCAGATTGGCGATGGACCCACCAGCAAAGGGAAACGCGATGCAACTGGTACTGACGAGCGGAGGTACACAGCGGCAAGGATTCGTGCGCGAAAGTGTGCTTCATACCTCTGCTCCCATTTGTATTTGCCCGAGGAACAAAAGAAGGAAATCTACTGA 993 0.5025 MQRVMAANLLQRRFFTRQRQIYEMTNMAAATITTTRKRVTEPCDVFLNHRCRDTKKTVASLLYDHLRRNGFNPFLDNKNMKPGDKLFDKINRGVLECKIGVAVFSPRYCESYFCLHELALLMECRKKVIPIFCDVKPSQLRVLNNGKWSHEDFRRFRWALDEAKHIVGLTYNSSKGKPAPKPSLHHCLVPLLPPRRPSHRPLFAFRLISRWHAVSFSSVRRLPLPLSLPLLTFLLAADKADLAEEKKQGSTILESGPAEVAPIEAHGVRPKNGTRRSRGQIGDGPTSKGKRDATGTDERRYTAARIRARKCASYLCSHLYLPEEQKKEIY 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01376 330 Pfam TIR domain 44 142 IPR000157 GO:0007165
Aip08g01376 330 SMART till_3 42 175 IPR000157 GO:0007165
Aip08g01376 330 MobiDBLite consensus disorder prediction 248 300 - -
Aip08g01376 330 SUPERFAMILY Toll/Interleukin receptor TIR domain 41 168 IPR035897 -
Aip08g01376 330 PANTHER COP1-INTERACTING PROTEIN-RELATED 34 177 - -
Aip08g01376 330 ProSiteProfiles TIR domain profile. 41 188 IPR000157 GO:0007165
Aip08g01376 330 Gene3D - 8 166 IPR035897 -
Aip08g01376 330 PANTHER TOLL-INTERLEUKIN-RESISTANCE (TIR) DOMAIN FAMILY PROTEIN 34 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01376 Aip-Chr8 21984669 21990568 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01376 45 172 Miscellaneous Gene Families AT1G57670 31.724 8.99e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01376 - - adu:107462512 346.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01376 08 21984669 21990568 Aip08g01376 08 21984669 21990568 ECH