Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01349 ATGGCAAACTTCCTCGCTCAGTTCCAATCCATCAAGAGTACCTCCGATCGCCTCGTCATTTCAGTCGAGGATGTGAGTGACTTGTGGCCGGCTGTCAAGCCTGCTTTTGAAGCACGGTTGCCGTTCAAGCAGGGGTCTTTGAATAACAAGACACGGAACCCTGTCTTAGTCGAGAAGTTGCCAGCTGAGTTCATATTAACTACAGATTCAAGGCTACGGAGCCGCTTCCCTCAGGAGCAGCTGTTATTTTGGTTTCGAGAGCCGTATGCAACTATTGTACTTGTTACCTGTGAGGATCTTGATGAGTTCAAAACCATCCTCAAACCACGTCTGAAATTAATTGTCCAAAATGATGAGAGAGAATGGTTTATTGTATTTGTATCTAGAGCTCATCCAGCAAATGATAAGGCAAGTGCAATGGCAAAAAAAGTATATGCCAAACTTGAAGTTGAGTTTAACACCAAAAAAAGAGAAAGATGCTGCAAGTATGATATACATTCGCCTGAATCAAATTTTTGGGAAGATCTAGAATCAAAGATAATGGAGTGCATCAGAAATACACTGGATAAGCGTGTACAATTTTATGAGGAAGAGATAAGAAAGCTCAGCGAACAGCGGCTCATGCCAGTCTGGAACTTCTGTAATTTTTTCATTTTGAAGGAAAGCTTGGCGTTTATGTTTGAAATGGCACACCTCCATGATGATGCCTTACGGGAGTATGATGAACTTGAACTCTGCTATATTGAAACAGTTAACAACACTGGAAAGCAAAGAGACTTTGGAGGGGCAGACCATGGTGACGATCAAGCAGCATTGCTTAATCCAGGAAACAAAGCTTTGACGCAGATTGTTCAAGATGACTCATTCAGGGAGTTTGAATTTCGACAGTATCTATTTGCCTGTCAATCAAAGCTCTTACTCAAGCTAAATCGTCTATTTGAGGTTGCATCAAGAGGTTATTCGTTCATAATAAGCTTCTCAAAATCTTTGGCACTGCATGAGCGTATTCTGCCCTTTTGCATGCGTGAAACCTGGGTGGTAACTGCTTGCTTGGCTTTAATTGACGCAATACTTTCTAATTATAATGATGGACTCATGGCACCTGACATAGAGAAAAGGTTCTTTCATCTTCTAGGTGACCTATATTCGCTAGCAAGAGTGAAGTTCATGAGGCTTGCCTATTTAATTGGATATGGAACTGAAATTGAAAGAAGTCCTGTCAACAGTGCTGCTCTCAGCTTGCTATCTTGGCCTAAGCCAGCAGTTTGGCCTTCAGTTCCTGCAGATGCCTCAGCAGAGGTGCTTGAGAAAGAAAAGGTGATTCTTCAAACTACGTCTAGAACCAAGCCTTTTGGTATCCAGAGGAAGCCCCTGCCTCTTGAACCTACTGTGCTGCTGCGAGAGGCCAACAGGCGGAGGGCTTCACTTTCAGCTGGAAATGCATTTGAAACATTTGATGGTCGCCAGGGTATAACCGAAGGATCAGGTTTTGATGCATCCACAAGGATGTCGCCATCACAGAAAGTACCTCCAAGTTCCATACCGCGCACTAATTCTTCACCTGGAAACTTTGATGGCTCAATTGACCGGCCTATGAGGCTTGCTGAGATTTTTGTTGCTGCTGAGCATGCTTTGAAGAAAACAATTTCCAGCCAAGAACTGTTGAAATCATTATCATCATCTGAGGAATTTGAGCAAAAATATTTGGAGCTAACTAAAGGTGCTGCTGACAATTATCATCGTTCCTTGTGGAAAAGACATGGAGTTGTCCTTGATGGTGAGATAGCAGCTGTCTCCTTTAAGCATGGGCATTTTGATCAAGCTGCAAAGTCATATGAGAAGGTTTGTGCACTTTATTCCGGTGAAGGATGGCAGGACTTGTTGGCTGAGGTCCTCCCTAATTTAGCCGAGTGTCAGAAGATACTCAATGATCAAGCTGGTTACTTACTATCTTGTTCAGAACTTGTTCGTCTTGCCCACAGTGAATTGAAAGACCCTGTACCTCTAGATGTATCATCATTAATAACATTTTCTGGAAATCCTGGACCACCATTGGAGTTATGTGATAGGGATCCTGGTACCCTTTCTGTTACTGTTTGGAGTGGTTTTCCAGATGATATAACTCTTGATTCAATTAATCTTACGATAGTGCCAACATCTAGTGCTGATGAAGGTGCAAAGGCATTGCAGAGTTCTACACCTAATGTCTTACATCCTGGTCGGAATACTATTACCTTGGATCTGCCACCCCAGAAACCAGGATCTTATGTTCTTGGAGTTCTTACTGGGCAGATTGGGCAGTTGAGGTTTAGATCTCATAGTTTTTCAAAAATAGGTCCTGCAGATACTGATGATTTCATGAGTTACGAAAAGCCGGCTAAACCTATTTTGAAGGTGTTAAGGCCTAGAGCTCTGGTTGATCTTGATGCTGCTGTTTCCTCACCTTTGTTAACAAATGAACGTCAGTGGATTGGTATTTTAGTTCGACCGATAAATTATTCCCTCAAAGGTGCTGTCTTGTATATTGATACTGGCCCAGGGTTGGAGATTGATGACTCGCATGTCATTGAGATGGAAACCTATGCTGATGTATCAGAAAATGATGACAACAAGGTGCAGAAAGACGGTGCTCAGATAGACTCTTTAAATTATGAGAAGAAGGTTGAACGCTTGACTCTTCATAATGGAAAAATTGAGTTTCCAAATTGGGCAAGTGACACTCCTTCTATTATCTGGGTTCTGGTTCGAGCCATGAGTGACATGCTCAGCAGAGGATCATCATCAGTTACAACTAGGAGAGAGAGCATTGTAGATGCCATGAGAACAATTGCTCTGAACCTTGAATTTGGAGTATACCACAATCAGATATTCGAAAGGACCCTGGCAGTTCATTTTACATATCCTTTCTATGTGACGACACGTGTAACCGATAAATGCAATGATGGTACATTGCTTTTGCAGGTTATACTTCACTCTGAAGTAAAGGCTACACTGACCATATATGATGCTTGGCTTGATCTTCAACATGGATTTATTCATAATGGTCAAACTGAGGGTAGACCTAGTTCAAGCCTCTTCCCACTAGTCATATCTCCTACTTCCAAAGCAGGAATTTTGTTTAGTATCTGCCTTGGCAAGACAAATGGAGAAGAAGACAGAAAGCAGCAAGAAAGCATATTAAATATCAAATATGGAATTTCTGGTGATAGAACAATTGGAGCCCACCCTCCTGTCATGGATGAATCTACTAAAGTTGATGATGCCAGACAGGAGTTGATCTTCAAGAATGCAATTACTTTGCAAAGGCCTGTGCTTGATCCATGCTTAGCTGTTGGTTTTCTTCCTCTCCCTTCAGATGGTCTAAGAGTTGGGCAACTAGTTAAGATGCAATGGAGGGTGGAAAGGTTAAAGGATTTGGATGAGAAAGAAGTTCCTGAACAGAATGATGAGGTTCTATACGAGGTAAAAGCGAATTCTGGAAATTGGATGATAGCTGGGAGGAAACGAGGGCATGTGTCGCTCTCCCCAAAACAAGGTGCAAGGATAATTATCTCAGTATTATGCATGCCACTGGTGGCTGGCTATGTTCGCCCGCCTCACCTTGGGCTACCAGACGTTGATGAAGCAGATGTAAGCTGCAAACCTGCTGGGCCGCATCTGGTTTGCGTTTTGCCCCCAGCTCTGAGCTCATCCTTCTGCATTCCAGTCAATTCATGA 3717 0.4267 MANFLAQFQSIKSTSDRLVISVEDVSDLWPAVKPAFEARLPFKQGSLNNKTRNPVLVEKLPAEFILTTDSRLRSRFPQEQLLFWFREPYATIVLVTCEDLDEFKTILKPRLKLIVQNDEREWFIVFVSRAHPANDKASAMAKKVYAKLEVEFNTKKRERCCKYDIHSPESNFWEDLESKIMECIRNTLDKRVQFYEEEIRKLSEQRLMPVWNFCNFFILKESLAFMFEMAHLHDDALREYDELELCYIETVNNTGKQRDFGGADHGDDQAALLNPGNKALTQIVQDDSFREFEFRQYLFACQSKLLLKLNRLFEVASRGYSFIISFSKSLALHERILPFCMRETWVVTACLALIDAILSNYNDGLMAPDIEKRFFHLLGDLYSLARVKFMRLAYLIGYGTEIERSPVNSAALSLLSWPKPAVWPSVPADASAEVLEKEKVILQTTSRTKPFGIQRKPLPLEPTVLLREANRRRASLSAGNAFETFDGRQGITEGSGFDASTRMSPSQKVPPSSIPRTNSSPGNFDGSIDRPMRLAEIFVAAEHALKKTISSQELLKSLSSSEEFEQKYLELTKGAADNYHRSLWKRHGVVLDGEIAAVSFKHGHFDQAAKSYEKVCALYSGEGWQDLLAEVLPNLAECQKILNDQAGYLLSCSELVRLAHSELKDPVPLDVSSLITFSGNPGPPLELCDRDPGTLSVTVWSGFPDDITLDSINLTIVPTSSADEGAKALQSSTPNVLHPGRNTITLDLPPQKPGSYVLGVLTGQIGQLRFRSHSFSKIGPADTDDFMSYEKPAKPILKVLRPRALVDLDAAVSSPLLTNERQWIGILVRPINYSLKGAVLYIDTGPGLEIDDSHVIEMETYADVSENDDNKVQKDGAQIDSLNYEKKVERLTLHNGKIEFPNWASDTPSIIWVLVRAMSDMLSRGSSSVTTRRESIVDAMRTIALNLEFGVYHNQIFERTLAVHFTYPFYVTTRVTDKCNDGTLLLQVILHSEVKATLTIYDAWLDLQHGFIHNGQTEGRPSSSLFPLVISPTSKAGILFSICLGKTNGEEDRKQQESILNIKYGISGDRTIGAHPPVMDESTKVDDARQELIFKNAITLQRPVLDPCLAVGFLPLPSDGLRVGQLVKMQWRVERLKDLDEKEVPEQNDEVLYEVKANSGNWMIAGRKRGHVSLSPKQGARIIISVLCMPLVAGYVRPPHLGLPDVDEADVSCKPAGPHLVCVLPPALSSSFCIPVNS 1238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01349 1238 PANTHER EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1/TMEM1 1 1236 IPR045126 GO:0048193|GO:1990071
Aip08g01349 1238 Pfam Trafficking protein particle complex subunit 10, TRAPPC10 1120 1206 IPR022233 -
Aip08g01349 1238 PANTHER BNAC09G30770D PROTEIN 1 1236 - -
Aip08g01349 1238 Coils Coil 185 205 - -
Aip08g01349 1238 MobiDBLite consensus disorder prediction 494 525 - -
Aip08g01349 1238 MobiDBLite consensus disorder prediction 486 526 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01349 K20307 - gmx:100787264 2152.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01349 08 21379413 21390272 Aip08g01349 08 21379413 21390272 ECH