Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01333 ATGGGTTTTCTTTTCGTGAAAACGGTTGTAATCTCCACCGGAATAGTGTCCATGGCAATGGGGCTGAAGCTCACAGTTCCACTCCTCACCGAAGCCGTACCTTCCATCTCCACCTTCTTCTTCACTTGTCTCACTCCTCCTTACCTCTACCTTCTCCTCAACTTCATCATCCTCTCCATCTTCGCCACCTCTAAGCTCACCCACCACCACAACCACTCTCCGCCGGACTCGCCTCCCGAGACCCTCCTCTACCACGCACCCGAACCACTCAAGATCTCGCAAAATGACTACAGCGGCGTCGTTTCGGAAGAATTCCTCTACGAGCCACCGAAAACCAACGAAACCGTCACCAACGACGAGAACTTACCGTTGAAAACGACGGTTACAGTATCCGAAGAAGCCGTTGGCATGCAGAAGAAGGACTCCTCGGATCTCGATTTGGCGTTCTCCGATGAGAACCAGAAACCGCCGGTATCCGCCAGGTTCAGCCACCGGAAAGCCGCTAAAGCAAGTCCAGAAGGAGGGAAGGTGGTTGCGTTGGGAGTAGCGAAGCCGAAGAGGCAGGACACACTGGAGAGCACATGGAGGACCATAACGGAAGGTCGGCCCATGCCGTTGACCAGGCATCTCAAGAAATCTGACACGTGGGAGCAGGCTCGCCGGAGCGCCGCTCCGTTGACGGATCTCAACGGCGGCGAAGGAGGTAAGACGCCTCCTCCTACGAAGATGAAGAAGGCCGAGACATTCGGCGGGAGGGAGAACAACGTTTCTCCGGCTGGTGGCAGCAGCAGCGCTGGCAGGCTGAGGAAGGAGCCATCACTGAGTCAGGATGAGTTGAATCGGCGAGTTGAAGCGTTCATTCACAAGTTCAATGAAGAGATGAGGCTGCAGAGGCAGGAATCGCTGAGGCAGTACCGTGCGATGGTAAATGGCGGAGTTCACTGA 945 0.5545 MGFLFVKTVVISTGIVSMAMGLKLTVPLLTEAVPSISTFFFTCLTPPYLYLLLNFIILSIFATSKLTHHHNHSPPDSPPETLLYHAPEPLKISQNDYSGVVSEEFLYEPPKTNETVTNDENLPLKTTVTVSEEAVGMQKKDSSDLDLAFSDENQKPPVSARFSHRKAAKASPEGGKVVALGVAKPKRQDTLESTWRTITEGRPMPLTRHLKKSDTWEQARRSAAPLTDLNGGEGGKTPPPTKMKKAETFGGRENNVSPAGGSSSAGRLRKEPSLSQDELNRRVEAFIHKFNEEMRLQRQESLRQYRAMVNGGVH 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01333 314 MobiDBLite consensus disorder prediction 210 276 - -
Aip08g01333 314 PANTHER COTTON FIBER (DUF761) 5 312 - -
Aip08g01333 314 Pfam Domain of unknown function (DUF4408) 34 66 IPR025520 -
Aip08g01333 314 Pfam Cotton fibre expressed protein 276 310 IPR008480 -
Aip08g01333 314 PANTHER DUF761 DOMAIN PROTEIN 5 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01333 Aip-Chr8 20882944 20884286 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01333 - - gmx:100818795 336.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01333 08 20882944 20884286 Aip08g01333 08 20882944 20884286 ECH