Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01301 ATGAAGACAGCAGGGAGCATATTCCTAAGGACTCACTTCCCCCCTCCAACTAAGCTCCTTTTCCTTCCTCTTACAAATCCCAAACACTCCCTCTCCCTAATTCCCATTTCCATATCCTTCACCCGCTTCTCATCCACCAATCCCAATCCAATCTTATACGGACCTTCCCTCCACAAAGGAACCGTTCCAACGCTTCAATGCCCCCAAAACGATGCCCTTCTCACCCTCCGTGAAGATGCCTTCACTCGCGTCTTCCACCTCTCCGCCCTCCGCGTCCCCTCCGCCCACTGCTCCGCCTTAGAGACTCGCCTCCGCGGCCACCTCCTCAACTGGCCTCGTGTTCGCAACATCGCTCGCGTCCCCGGTGATGACCTCGATCCCGACCTTGCTTCGCTAGTTACCTCCGGAGAATCAGGAGGAGGAGAAGAAGGACACGTGTCGTTGCAGCGACGGATTTACGGCCAAGCCGAGGGAGACGGCGACGTTTTGAGCCCCGTTCTGTACAGAGAGAAGCTCGCAAGGACGTTCAATACGCGCGGCTTCGTGAAGTTCAGGAACCTGGCGAAGATATCGAGGCCGCCGAAGAGGAAGAAGAAGAAGAAGGAGGAGGAGGAGGAGGAGGAGGTGAAAGTCGAGAGGCGCACGGGGAAGAACGGTTTTGCTACGGTGGAGGTTGTTGAAGAGGACGATAATGGAGGGGGTATTTTGGGGAATTTGGTTGAGGAGGAGTTTGGGAGGGAGAAGTGGAGGGGCTCCACGAGGTTGCTGTTGCTGGATGAACGGTACGCCGGTCGCGGCGTCCAAGACTTGCCTGAGGCTATCAAGGCCGTATTAAAGGAGTATGCCGAAAAGAGTGCAAATTTGACTTTTGAGCTAGTTAGGTGCAAGTTGACTCTGTTTTATGATTATTGGCAGATGAATGAGATCCTGGAGGTCTTGCTACCTGATGGTGTGGTTGTTCCTTCAGCTTTTGAGACCGTTGGTCACATTGCACACCTGAATTTGAGAGAGGAACATTTACCATACAAAACACTCATAGCAAAGGTTGTGCTGGATAAAAATAAGCCAAAGATACAAACAGTTGTGAACAAGATTGATTCCATTCATAATGAATACAGGACCATGCAGCTTGAGGTTCTAGCAGGAAACCACTCTCTAGTTACCACAGTTGTTGAGAACGGAATACGCTTTCAGGTTGACTTAGCAACAGTATACTGGAGTTCTAGGCTTGCAACTGAAAGACAAAGGCTTCTGAGTGGTTTTACACGGAAAGATGTTGTCTGTGATGTTTTTTCTGGAGTTGGTCCCTTGGCCATATCTGCAGCAAAGATAGTTAAGCATGTTTTCGCTAATGATCTAAACCCATTTGCAGTGGAGTATCTGGAAAGAAATAGTGTTCTAAACAAACTTGAAAGGAAGATTGAGGTCTTTAACATGGATGGGAGAAGGTTCATTAGGGCTATGTATGCCAGTGATAAAGCTCAATCAATCACGCAAGTGGTTATGAACTTGCCAAATGAAGCTGCAGAATTTCTAGATGCATTTAGGGGAATATACAAAGACAGACCCAAGGACACGGAATGTAACTTGCCAACGATCCATGTTTATGGATTCTCCAAAGCGCAAGATCCGGAATTTGATTTTCACGAGAGAATAAGAATTGCCCTGCTAGAGGTCGCAGTCAACGTAGAAATGCGACGTGTACGACTTGTGGCGCCCGGAAAATGGATGTTGTGTGCATCATTCGTTCTCCCTAGAAGTGTCGCATTTGCTAATACTGCAATTGATACTTAA 1794 0.4838 MKTAGSIFLRTHFPPPTKLLFLPLTNPKHSLSLIPISISFTRFSSTNPNPILYGPSLHKGTVPTLQCPQNDALLTLREDAFTRVFHLSALRVPSAHCSALETRLRGHLLNWPRVRNIARVPGDDLDPDLASLVTSGESGGGEEGHVSLQRRIYGQAEGDGDVLSPVLYREKLARTFNTRGFVKFRNLAKISRPPKRKKKKKEEEEEEEVKVERRTGKNGFATVEVVEEDDNGGGILGNLVEEEFGREKWRGSTRLLLLDERYAGRGVQDLPEAIKAVLKEYAEKSANLTFELVRCKLTLFYDYWQMNEILEVLLPDGVVVPSAFETVGHIAHLNLREEHLPYKTLIAKVVLDKNKPKIQTVVNKIDSIHNEYRTMQLEVLAGNHSLVTTVVENGIRFQVDLATVYWSSRLATERQRLLSGFTRKDVVCDVFSGVGPLAISAAKIVKHVFANDLNPFAVEYLERNSVLNKLERKIEVFNMDGRRFIRAMYASDKAQSITQVVMNLPNEAAEFLDAFRGIYKDRPKDTECNLPTIHVYGFSKAQDPEFDFHERIRIALLEVAVNVEMRRVRLVAPGKWMLCASFVLPRSVAFANTAIDT 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01301 597 PANTHER TRNA METHYLTRANSFERASE 42 594 - -
Aip08g01301 597 ProSiteProfiles SAM-dependent methyltransferase TRM5/TYW2-type domain profile. 324 586 IPR030382 -
Aip08g01301 597 Coils Coil 195 215 - -
Aip08g01301 597 CDD AdoMet_MTases 427 484 - -
Aip08g01301 597 Pfam Met-10+ like-protein 323 522 IPR030382 -
Aip08g01301 597 Gene3D Vaccinia Virus protein VP39 387 584 IPR029063 -
Aip08g01301 597 Hamap tRNA (guanine(37)-N1)-methyltransferase [TRMT5]. 73 586 IPR025792 GO:0009019|GO:0030488
Aip08g01301 597 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 320 586 IPR029063 -
Aip08g01301 597 PANTHER TRNA (GUANINE(37)-N1)-METHYLTRANSFERASE 2 42 594 - -
Aip08g01301 597 Gene3D - 305 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01301 Aip-Chr8 19966617 19971412 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01301 K15429 - gmx:100797627 845.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01301 08 19966617 19971412 Aip08g01301 08 19966617 19971412 ECH