Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01264 ATGCAAAACAAGAAAGATCTATGGTTTTGGTCCATTCTATTCTCATTTATATTAAGAAACTCTACTTCACTGGACAATATAACTCCTGTTCAATCCATCACTGATGGAGAGACATTAATTTCGAGTGGAGGAACCTTTGAACTTGGCTTCTACAGCCCTGGAAATTCAAAGGGCCGATACTTGGGAATCTGGTACCATAACATATCCCCTCAGGTAGTGGTCTGGGTGGCTAATAGAGAAAAACCGCTCAACAACACCTCCGGAGTTCTAAAACTCACCGGCGAAGGACTTGTTGTCCTTATTAATGGCAGCACCAACAGCAGCGTTGTATGGTCCTCCAACATGTCAAGCAAAGCAGGAGAAAAACGGAATCCGATTGCACAGCTCTTGGAATCTGGAAATCTTGTTGTCAAAGATGGTGACCACTTTCTGTGGCAGAGCTTTGATTATCCTTGTGATACATTCGTGCCCGGAATGAAGGTGGGATGGGATCTTGGGACAAGTCTAGAGAGGACTCTATCATCTTCAAAAAGTACAGATGATCCCGGCCGCGGAGACTACACAGTTAGAATAGACCTTCGAGGCGATCCGCAAATAGTTCTAATGCATGGAAATGCCACAACAATTAGAGTAGGGCCATGGAATGGGCTAATTTTTTCTGGAGCTACACTTTATTTGCGCTATAACCAATTCTCATCTCAATTTGTTTTCAATGAAAAAGAGGTGTTTGCTAGGTTCAGACCAGAAAATACATCCAAATATATTAGAGGTGTAGTGTACCCTTGGGGAGGTGTTCAGGTTTTGCATTGGTCAATACAAACCAGAGGCTGGGAGACCCTTATTTCTATACCAGAAGCCGAATGTGACAAGTATGCTATTTGTGGTGCAAATTCTATTTGCAGTACTACTCCTACTCCTGTCTGTTCATGCCTTGAAGGATTTGCACCAAAATATCCTGGAAAATGGAAGGAATCTGATTGGTCTGATGGTTGTGTTAGGATCACTCCTTTAAGTTGCAGCAGAGATGGATTCAAGAAGGTCACCGGCATAGTGTTGCCGGACACGTCTGCTTCTTGGTATAACAGGACCATGAACCTGCTGGAATGCAAGGAATTCTGTCTGAAAAATTGTTCTTATACGGCATATTCCGATTTGGATATCCGTGATGGAGGAAGCGGTTGCTTGATCTGGTTTCATGATCTTGTTGACAATAGACAAGGGTCACATGACTTCTATATTCGAATAGGGGTGACCCAAAATTGTTTGTACCGTATTGGAAGATGA 1284 0.4291 MQNKKDLWFWSILFSFILRNSTSLDNITPVQSITDGETLISSGGTFELGFYSPGNSKGRYLGIWYHNISPQVVVWVANREKPLNNTSGVLKLTGEGLVVLINGSTNSSVVWSSNMSSKAGEKRNPIAQLLESGNLVVKDGDHFLWQSFDYPCDTFVPGMKVGWDLGTSLERTLSSSKSTDDPGRGDYTVRIDLRGDPQIVLMHGNATTIRVGPWNGLIFSGATLYLRYNQFSSQFVFNEKEVFARFRPENTSKYIRGVVYPWGGVQVLHWSIQTRGWETLISIPEAECDKYAICGANSICSTTPTPVCSCLEGFAPKYPGKWKESDWSDGCVRITPLSCSRDGFKKVTGIVLPDTSASWYNRTMNLLECKEFCLKNCSYTAYSDLDIRDGGSGCLIWFHDLVDNRQGSHDFYIRIGVTQNCLYRIGR 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01264 427 Gene3D - 20 148 IPR036426 -
Aip08g01264 427 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 216 IPR036426 -
Aip08g01264 427 Pfam S-locus glycoprotein domain 210 317 IPR000858 GO:0048544
Aip08g01264 427 SMART blect_4 30 151 IPR001480 -
Aip08g01264 427 SMART ntp_6 339 415 IPR003609 -
Aip08g01264 427 Gene3D Hepatocyte Growth Factor 337 414 - -
Aip08g01264 427 ProSiteProfiles PAN/Apple domain profile. 339 416 IPR003609 -
Aip08g01264 427 PANTHER - 14 417 - -
Aip08g01264 427 CDD B_lectin 30 151 IPR001480 -
Aip08g01264 427 PIRSF SLG 7 421 IPR035446 -
Aip08g01264 427 Pfam D-mannose binding lectin 73 177 IPR001480 -
Aip08g01264 427 ProSiteProfiles Bulb-type lectin domain profile. 24 150 IPR001480 -
Aip08g01264 427 Pfam PAN-like domain 339 403 IPR003609 -
Aip08g01264 427 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 14 417 - -
Aip08g01264 427 CDD PAN_AP_plant 335 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01264 Aip-Chr8 18800105 18801486 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01264 - - aip:107611884 815.839
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01264 08 18800105 18801486 Aip08g01264 08 18800105 18801486 ECH