Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01203 ATGTATGGACATGTTGAGAAGCTAGCACAAGAAATCAAGAAAGGCGCTGCTTCGGTAGAAGGCGTTGAGGTCAAAATATGGCAGGTGCCTGAGACACTGCCAGAAGAAGTGCTTGGTAAGATGGGTGCACCACCAAAGACCGATGCACCAATCATCACCGCCGACGAACTCGCCACGGCTGATGGTTTTGTCTTTGGCTTCCCTACTAGATTCGGGATGATGCCTGCTCAATTTAAGGCTTTCCTAGATTCCACCGGAGGTCTATGGAGGACACAACAGCTTGCAGGCAAGCCAGCCGGAATCTTCTATAGCACCGGTTCCCAGGGCGGCGGACAAGAGACAACAGCGCTTACTGCTATCACTCAGCTTGTACATCACGGAATGATATTCGTTCCGATCGGATACACATTTGGTGCCGGCATGTTTGAGATGGAGAACGTGAAAGGTGGAAGTCCATACGGGGCCGGAACTTATGCCGGTGACGGCTCAAGGCAGCCATCTCAGCTTGAGTTGGACCAAGCATTCCACCAAGGAAAGTACCTTGCATCCATCACAAAGAAGCTCAAGAAGGAACAAGCTGCATAA 585 0.5094 MYGHVEKLAQEIKKGAASVEGVEVKIWQVPETLPEEVLGKMGAPPKTDAPIITADELATADGFVFGFPTRFGMMPAQFKAFLDSTGGLWRTQQLAGKPAGIFYSTGSQGGGQETTALTAITQLVHHGMIFVPIGYTFGAGMFEMENVKGGSPYGAGTYAGDGSRQPSQLELDQAFHQGKYLASITKKLKKEQAA 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01203 194 SUPERFAMILY Flavoproteins 1 189 IPR029039 -
Aip08g01203 194 ProSiteProfiles Flavodoxin-like domain profile. 1 181 IPR008254 GO:0010181
Aip08g01203 194 TIGRFAM flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 1 188 IPR010089 GO:0003955|GO:0010181
Aip08g01203 194 Pfam NADPH-dependent FMN reductase 6 133 IPR005025 GO:0016491
Aip08g01203 194 Gene3D - 1 190 IPR029039 -
Aip08g01203 194 PANTHER FLAVOPROTEIN WRBA, FLAVOPROTEIN-LIKE DOMAIN PROTEIN-RELATED 1 189 - -
Aip08g01203 194 PANTHER FLAVODOXIN-RELATED PROTEIN WRBA-RELATED 1 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01203 Aip-Chr8 17112487 17114328 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01203 K03809 - rcu:8259333 350.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01203 08 17112487 17114328 Aip08g01203 08 17112487 17114328 ECH