Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01199 ATGCCTGAGGCACCAAAAGAGTATGACCTGGCGGGGGAGAACAGGAGGGTCCTGGACTTCATCGAGTATGTCACTGCAAACGCCGATGCGGTGCAGAGAGACATACTCGGTGAGATTCTGTCCCGTAATGTCGGTGTAGAGTATCTACGCCGGCATGGCCTTGAAGGCCGCACGGACCGGGACACCTTCAAGAAGCTTCTCCCCGTCATAACTTACGAGGACATCCAACAAGATGTTCTTCGCATAGCCAATGGAGACACTTCTCCAATACTCACTTCAAAGCCTATCTCAGAGTTTCTCACTAGCTCTGGGACATCAGGAGGAGAGAGAAAGCTGATGCCAACAATTGAAGAAGAGCTAGGAAGAAGGTGCTTGCTTTATAGCCTATTAATGCCAATAATGAGTCAATTTGTGCCTGACCTAGAAAAGGGCAAAGGCATGTACCTTATGTTCATAAAATCCGAGTCTTGGACACCTGGGGGGATAGTGGCTCGGCCAGTCCTCACAAGCTACTACAAGAGCCCTTATTTTAAGGACAGACCCTATGACCCATACACTAACTACACAAGCCCAAATGAAACCGTCCTTTGCCCTGATTCCTACCAAAGCATGTACTCACAACTTCTTTGTGGCCTTTGCCAAAACAAAGAAGTTGTGAGGGTTGGAGCTGTTTTTGCTTCCGCTTTTATTAGGGCCATAAGGTTTCTTGAGAAACATTGGGTCCTACTTTGTAACGACATAAGGACCGGATCTCTAAATCCCAATATCATCTCTGACCAGACAGTCAGAGACGCCGTGAAAAAGATTCTTGATAAACCCAATCCGTATCTTGCGGATTTTATCGAGAGTGAGTGTAGTAAGAGTTCGTGGCAGGGGATTATCACGAGATTGTGGCCCAACACAAAGTATGTGGATGTTATTGTGACGGGAACTATGTCACAATATATACCAACATTGGATTACTATAGCAATGGGCTACCACTTGTGTGTACCATGTATGCATCAAGTGAGTGTTACTTTGGTGTGAATCTAAATCCTCTTTGCAAACCAAGTGAGGTGTCCTACACCCTCATCCCTTCAATGTGCTACTATGAGTTTTTGCCGGTTAACCGGAGCGACGAGGTCACCGGTTCGCTTCACATGCCAAAATCGCTCAATGAGAAGGAGCAACAGGAGCTGGTGGAGCTTGTGGATGTTAAGCTTGGCCAAGAATATGAGCTTGTGGTCACAACTTTTTCCGGCCTCTATAGGTATAGAGTGGGTGATGTCCTAAGGGTGTCTGGATTCAAGAACAAGGCGCCACAATTCAACTTCGTCTGCCGGAAAAATGTTGTCCTAAGCATAGATTCCGACAAGACCGATGAGACGGAACTCCAAAATGCCATGAAAAATGCCGTGACACACCTCCTCCCCTTCGATGCGGCGGTGGTCGAATACACCAGTTATGCGGACACCACAACCATCCCGGGCCACTATGTGCTCTATTGGGAACTCACTCTAAACGGTGGGACACCAATCCCACCGTGCGTGTACGAGGATTGCTGTCTTGCCGTAGAGGAGTCCCTCAACAGTGTGTACCGGCAAGGACGTGTGTCCGACAAGTCGATTGGGCCACTCGAAATAAGGATTGTGGAGCAAGGAACCTTTGATAAGCTCATGGACTATGCCATAAGCTTAGGTGCATCAATTAACCAATATAAGGCACCTAGGTGTGTTAAGTTTCCACCTGTGCTGGAGCTATTGAACTCAAGGGTGGTTGAAAGGTTCTTTAGCCCAAAATGTCCAAAATGGGTCCCCGGACACAAGCAATGGAGCAATGGTCAGAACTGA 1830 0.476 MPEAPKEYDLAGENRRVLDFIEYVTANADAVQRDILGEILSRNVGVEYLRRHGLEGRTDRDTFKKLLPVITYEDIQQDVLRIANGDTSPILTSKPISEFLTSSGTSGGERKLMPTIEEELGRRCLLYSLLMPIMSQFVPDLEKGKGMYLMFIKSESWTPGGIVARPVLTSYYKSPYFKDRPYDPYTNYTSPNETVLCPDSYQSMYSQLLCGLCQNKEVVRVGAVFASAFIRAIRFLEKHWVLLCNDIRTGSLNPNIISDQTVRDAVKKILDKPNPYLADFIESECSKSSWQGIITRLWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFGVNLNPLCKPSEVSYTLIPSMCYYEFLPVNRSDEVTGSLHMPKSLNEKEQQELVELVDVKLGQEYELVVTTFSGLYRYRVGDVLRVSGFKNKAPQFNFVCRKNVVLSIDSDKTDETELQNAMKNAVTHLLPFDAAVVEYTSYADTTTIPGHYVLYWELTLNGGTPIPPCVYEDCCLAVEESLNSVYRQGRVSDKSIGPLEIRIVEQGTFDKLMDYAISLGASINQYKAPRCVKFPPVLELLNSRVVERFFSPKCPKWVPGHKQWSNGQN 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01199 609 Pfam GH3 auxin-responsive promoter 21 573 IPR004993 -
Aip08g01199 609 PANTHER - 7 605 - -
Aip08g01199 609 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 7 605 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01199 Aip-Chr8 16975456 16978739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01199 9 591 EF-hand Containing Proteins AT1G23160 48.900 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01199 K14487 - gmx:100791987 1075.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01199 08 16975456 16978739 Aip08g01199 08 16975456 16978739 ECH