Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01152 ATGTCTCTTGAAGCTGCCTCCATTCCTGTGTTGATTATTACGACTCAAGATTCAACATCTTCTAACTTGAAGCGATCTTATACAAACTTTGCTCCTAGCATTTGGCATGATACTTTCCTTCACTATGCTGATCCACAATCATTGGAAATCAATGAAATTCTGAAGGAAAAAGTTCAAGTACATAAAGAAAAAGTGAAGATGTATTTATCTTCTAATGATAATATCTCACAAAAATTAAATATTATTGACTCAATTCAATGTTTGGGTTTATCTTACCATTTTGAACGTGAAATTGACGAAATATTAGCACAAATTCACTTTCATTTTACCAACAATAGCCTTGGTACAAAGCAAAGTAGCCTTTATTTTCTTGCATTATTCTTTCGTTTGCTTCGACAAAATGGATATCATGTTTCTTCAGATATATTTAACAAATTCATCAAGAACAACGAAGGAAAATTCAATGAAATCATTACTCAAGATGTTGAAGGAATGTGGAGCTTGTATGAAGCTACACAACTAAGGGTTCATGGAGAGAATATATTAGAAGAAGCACATAATTACACATACACTAATCTAAAGTCCATTACCAATCAATTGAGTCAATCTCTTGCTGAACAAACCAATCGGAGCCTAAAGCAACCTCTTCACAAGGCAGTTCCAAGGATAGGAGCAAGGTCATACATGTCTTTTTATGAAGAAGATCCTTCTCATAGCAAATTTCTTCTGACCTTTGCAAGATTAGACTTCAATTTGCTACAAAAATTACATCAACAAGAATTAGGCAATATCACCAAGTGGTGGAAGAGATCAGAATTTGCAACTAAGGTGCCATACATCAGAGATAGGGTGGTTGAGGCATTCTTTTGGCCATTCGCCATGTCCTCCGAACCTAATTACAGCACTACAAGATGCATGATAGGCAAATTTGGTGCATGTATCTCTCTTGTTGATGATACTTATGACGTCTATGGCACAGTTCAAGAACTTGAACTTTTCACAGAGGCCATCCAAAGATGGGATAGTAGTTGCATTGCATCTCTTCCAGAGTGTATGAGAGTGGTGTTTAATGCAATTATAGAACTCTTCGTTGAAATAGAGTCGTTGATTATTGACAGTGGAAAGTCAAACTTGGTGTTGCAACATGTTAAACAGGCTTTTTCCAACATGGCACATGGTTACATGGTTGAAGCAAAATGGTGTGATGAGGGCTATATTCCAACGTATGATGAGTACAAGGTCAACGGAATATTGACTTCCGTATACCCATTTCTTGTAACAACGTTCATTGCTTTGGGAGAATTTGCAACCAAAGAAATGTTTGATTGGGTCTTCAATGTTCCAATAATCTTAAAAGCTGCAACATTTATTTGCAGACTTACCAATGACTTGGCCTCACATAAGTTTGAGCAGCAAAGGAAACATGTTGCTTCCGCGGTGGAATGTTGCATGGAGCAATATGACATTTCTCAAGAACAGGCTTATGAAGTCATTAATAAGGAAATCAGTAATTGTTGGAAAGATGTAAATGAAGCGTACCTCAACTCACATGATATCCCAAAACATGTGCTTGATTCTATAGTTAATTTGGCACGCATAAGTGAGTTTATGTATGAAAACTTTGAAGATAAATACACCAACAATGAACTTCTAAAGAATTACGTTGCTACGTTGTTTTTGGATCCCATCGTCATCTAG 1698 0.3622 MSLEAASIPVLIITTQDSTSSNLKRSYTNFAPSIWHDTFLHYADPQSLEINEILKEKVQVHKEKVKMYLSSNDNISQKLNIIDSIQCLGLSYHFEREIDEILAQIHFHFTNNSLGTKQSSLYFLALFFRLLRQNGYHVSSDIFNKFIKNNEGKFNEIITQDVEGMWSLYEATQLRVHGENILEEAHNYTYTNLKSITNQLSQSLAEQTNRSLKQPLHKAVPRIGARSYMSFYEEDPSHSKFLLTFARLDFNLLQKLHQQELGNITKWWKRSEFATKVPYIRDRVVEAFFWPFAMSSEPNYSTTRCMIGKFGACISLVDDTYDVYGTVQELELFTEAIQRWDSSCIASLPECMRVVFNAIIELFVEIESLIIDSGKSNLVLQHVKQAFSNMAHGYMVEAKWCDEGYIPTYDEYKVNGILTSVYPFLVTTFIALGEFATKEMFDWVFNVPIILKAATFICRLTNDLASHKFEQQRKHVASAVECCMEQYDISQEQAYEVINKEISNCWKDVNEAYLNSHDIPKHVLDSIVNLARISEFMYENFEDKYTNNELLKNYVATLFLDPIVI 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01152 565 PANTHER OS04G0344100 PROTEIN-RELATED 15 561 - -
Aip08g01152 565 Pfam Terpene synthase family, metal binding domain 243 508 IPR005630 GO:0000287|GO:0010333|GO:0016829
Aip08g01152 565 Gene3D Farnesyl Diphosphate Synthase 32 549 IPR008949 -
Aip08g01152 565 CDD Terpene_cyclase_plant_C1 25 562 IPR044814 GO:0010333|GO:0016102
Aip08g01152 565 Pfam Terpene synthase, N-terminal domain 34 211 IPR001906 GO:0010333|GO:0016829
Aip08g01152 565 SFLD Isoprenoid Synthase Type I 240 564 - -
Aip08g01152 565 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 32 238 IPR008930 -
Aip08g01152 565 SFLD Terpene Cyclase Like 1 C Terminal Domain 240 564 IPR034741 -
Aip08g01152 565 PANTHER TERPENE SYNTHASE FAMILY, METAL-BINDING DOMAIN PROTEIN 15 561 - -
Aip08g01152 565 Gene3D - 73 238 IPR036965 GO:0010333|GO:0016829
Aip08g01152 565 SUPERFAMILY Terpenoid synthases 238 563 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01152 Aip-Chr8 15791144 15796130 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01152 K15803 - gmx:100781367 622.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01152 08 15791144 15796130 Aip08g01152 08 15791144 15796130 ECH