Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01140 ATGTCTCTTGCTGCTGCTACAAATGATGATCAACATTTATCATATGATATAACACGACCTTGTGCAAATTTTCGACCCAGCATTTGGGGCGATTTGTTCCTTCAATATCACAATTCACATCCATTATTATTGGAAGTACCAGATGACAATACGGAGCAACAAGCTCAAAAGCTCAGAGAGGAAGTGAGGGTGCAGCTCTCTTCAGATAATGATATTTTACAAAAATTAAATATCATTGATTCAATTCAACGTTTAGATATATCTTATCATTTTGAACATGAAATTGAGAAAGCAATCAATCAAATCTACATTAACTTTACCAACAATAAGTTTATTATCCCAAAAGAAGGTGGAATTCACTTTCACGCATTACTCTTTCGTTTGCTCAGACAAAAAGGATATCAAATTTCATCAGATATATTTAACAAATTCAAGAACAGTGAAGGAAGGTTCAGAGAAATAATTTCTCAAGATGTTAAAGGAATATGGAGTTTGTATGAGGCTGCACAATTGAGTGTTCATGGAGAAGCTATATTAGAGGAAGCACATGATTTCACATACACTAAACTAAAGTCCTTCACCAATCAATTGAGTGAATCTGTTGCCGGGCAAATCGACCAGAGCTTAAAACAACCTCTTCACAAGGCAGTTCCAAGGATAGGGACAAGGTCATATATGTCTTTTTATGAAGAAGATCCTTCTCATAACAAATTTCTTTTAACTTTTGCAAAATTAGATTTCAACATGCTACAGAAATTGCATCAAACTGAAGTTGGTAATATCACCAAGTGGTGGAAAAACGGTGAGTTTTCGATAAAGATCCCTTATGCAAGAGAAAGAGTGGTTGAAGCATATTTTTGGCCATTAGCCATATCCTGTGATCCAAAATATAGCACTGCAAGAATGTTGATGACCAAATTGGTTGTATGCATCTCTTTTCTTGATGATACTTATGATGCCTATGGCACACTCCAAGAACTTGAGCTCTTCACACAGGCAATCCAAAGGTGGGATATTAGTCTCATTAAATCTCTTCCGGAATGCATGAAAGCCGTATTTAATACAATTTTAGAAATGTGGGATGAAATTGAGTCAATGACTTCAAAAGATGAAATTTCAGGTTTGGTGTTGCAACATATTAAACAAGAGTTTTTTAACTTGGCACAATCCTACTTGGTTGAAGCAAAATGGTGTCATAGGGGCTATATTCCAACATATGATGAGTATAAGGTTAATGGAGCTATATCTTCTACATTGCCACTTCAGATCATAGCTTTTCTTGGTTTGGCAGGATTTGCAACAAAAGAAGTGTTTGATTGGATAATAATGAGTGATCCAAAAATTGTAAAAGCTGTGTCACTTATTGGCAGACTCATGGATGATATGGCCTCACATAAGTTTGAGCAGCAAAGAGAACATGTTGCTTCTGCAATTGAATGCTGCATGAAACAATACGATCTTTCTCAAGAAGAGGCCAACAAACTCATTCTAAAGGAGATCAGAGATTATTGGAAGGATATAAACGAAGAATGTCTTAAATCAAATAATATCCCAAGACCCGTGCTTGATTCTGTTCTTAATTTTGCTCGTATAACTGAGTTTACATACTCAAACTTTGAGGATAAATACACAAACATTGAACTGCTAAGAGAATATGTTGTTGCACTACTTTTGGATCCAATTGTCTTCTAA 1692 0.3534 MSLAAATNDDQHLSYDITRPCANFRPSIWGDLFLQYHNSHPLLLEVPDDNTEQQAQKLREEVRVQLSSDNDILQKLNIIDSIQRLDISYHFEHEIEKAINQIYINFTNNKFIIPKEGGIHFHALLFRLLRQKGYQISSDIFNKFKNSEGRFREIISQDVKGIWSLYEAAQLSVHGEAILEEAHDFTYTKLKSFTNQLSESVAGQIDQSLKQPLHKAVPRIGTRSYMSFYEEDPSHNKFLLTFAKLDFNMLQKLHQTEVGNITKWWKNGEFSIKIPYARERVVEAYFWPLAISCDPKYSTARMLMTKLVVCISFLDDTYDAYGTLQELELFTQAIQRWDISLIKSLPECMKAVFNTILEMWDEIESMTSKDEISGLVLQHIKQEFFNLAQSYLVEAKWCHRGYIPTYDEYKVNGAISSTLPLQIIAFLGLAGFATKEVFDWIIMSDPKIVKAVSLIGRLMDDMASHKFEQQREHVASAIECCMKQYDLSQEEANKLILKEIRDYWKDINEECLKSNNIPRPVLDSVLNFARITEFTYSNFEDKYTNIELLREYVVALLLDPIVF 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01140 563 PANTHER OS04G0344100 PROTEIN-RELATED 2 560 - -
Aip08g01140 563 Gene3D Farnesyl Diphosphate Synthase 26 546 IPR008949 -
Aip08g01140 563 SFLD Terpene Cyclase Like 1 C Terminal Domain 235 562 IPR034741 -
Aip08g01140 563 SUPERFAMILY Terpenoid synthases 235 561 IPR008949 -
Aip08g01140 563 Pfam Terpene synthase family, metal binding domain 240 506 IPR005630 GO:0000287|GO:0010333|GO:0016829
Aip08g01140 563 SFLD Isoprenoid Synthase Type I 235 562 - -
Aip08g01140 563 Pfam Terpene synthase, N-terminal domain 28 209 IPR001906 GO:0010333|GO:0016829
Aip08g01140 563 PANTHER TERPENE SYNTHASE FAMILY, METAL-BINDING DOMAIN PROTEIN 2 560 - -
Aip08g01140 563 CDD Terpene_cyclase_plant_C1 19 560 IPR044814 GO:0010333|GO:0016102
Aip08g01140 563 Gene3D - 70 235 IPR036965 GO:0010333|GO:0016829
Aip08g01140 563 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 26 235 IPR008930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01140 Aip-Chr8 15524146 15532265 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01140 K15803 - gmx:100781367 640.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01140 08 15524146 15532265 Aip08g01140 08 15524146 15532265 ECH