Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01118 ATGCAGCTTCACATATCACCAAGTTTAAGACATGTAACTGTGCTACCAGGAAAAGGGTTGAAGGAATTCATCAAAGTTAAGATTGCGTCGCGGCGAGTCTCTTATAGGATGCTCTTCTATTCACTCCTGTTCTTCACATTCCTTCTCAGGTTTGTGTTTGTTTTGACATCAGTGGATGGCATTGATGGAGGAGAAACCAAGTGCTCTACCATAGGTTGCTTGGGAAAAAAACTGGGGCCAAAACTTATGGGGAAAAAGACTGAATCAAATGTGCCAGAAGTAATATACCAAACATTAGATGCACCCCTTAATAAAGATGAGCTAAAGGGAAGATCTGATATTCCACAGACTTTAGAAGACTTCATGACAGAAGTTAAGAAAGGTGGATTTGATGCCAAGACATTTGCTGTTAAACTCAGAGAAATGGTGACCCTTATGGAACAAAGGACCCGAAATGCAAAAATCCAAGAATATCTATATCGCCATGTAGCATCGAGCAGCATACCAAAACAACTTCACTGCCTTGACTTGAGGCTGGCCAGCGAGCACACCAACAACGCAGCAGCACGGCTTCAGCTACCCTCTGCAGAATTAGTCCCTGCCCTAGTTGACAATTCCTACTTCCACTTTGTCCTTGCCTCAGACAATGTTCTGGCTGCTTCAGTCGTTGCAGCATCGCTTGTCCGCAACTGTTTGCGGCCCCAGAAAGTTGTTCTGCACATAATTACAGATAAAAAGACTTATTATCCCATGCAGGCATGGTTCTCCTTGCACCCTTTATCACCTGCTATAATTGAGGTCAAAGCATTGCATCATTTCGATTGGTTTACAAAGGGTAAGGTGCCTGTGCTGGAAGCAATGGAGAAAGACCAGAAGGTGCGGTCACAGTTTAGAGGAGGATCATCAGCTATAGTAGCAAATACCACTGAGAAGCCACAAGTTATTGCAGCAAAGCTACAAACACTTAGTCCCAAGTATAATTCAGTGATGAACCATATCCGAATACATCTTCCAGAGTTGTTTCCAAGTCTTAACAAGGTGGTCTTCCTCGACGATGACATAGTAATACAAACTGATCTTACGCCTCTGTGGGACATTGACATGAATGGAAAAGTCAATGGAGCAGTAGAAACATGTACTGGAGAAGATAAGTTTGTGATGTCAAAGAGGTTGAAAAGCTATTTGAACTTCTCTCACCCTCTCATATTGAAAAACTTCAATCCCAAGGAGTGCGCCTGGGCTTATGGAATGAACATTTTTGACTTGGAGGCTTGGAGGAAAACCAATATAAGCTTTACATACCACCATTGGGTTGAGCAGAATATAAAATCAGACCTGAGCCTGTGGCAGCTAGGCACATTACCTCCTGGGTTGATTGCATTTCATGGCCATGTTCACATTATTGATCCTTTCTGGCATATGCTGGGATTGGGATATCAAGAAGACACAAGTTTTGCTGATGCCGAGAGTGCCGGTGTCATCCATTTCAATGGCAGGGCGAAGCCATGGCTAGACATAGCTTTTCCACAACTGAAGCCATTATGGACTAAATATGTTAACTTTTCGGATAAATTCATCAAGAGCTGTCATATTAAGGCATCATAG 1605 0.4287 MQLHISPSLRHVTVLPGKGLKEFIKVKIASRRVSYRMLFYSLLFFTFLLRFVFVLTSVDGIDGGETKCSTIGCLGKKLGPKLMGKKTESNVPEVIYQTLDAPLNKDELKGRSDIPQTLEDFMTEVKKGGFDAKTFAVKLREMVTLMEQRTRNAKIQEYLYRHVASSSIPKQLHCLDLRLASEHTNNAAARLQLPSAELVPALVDNSYFHFVLASDNVLAASVVAASLVRNCLRPQKVVLHIITDKKTYYPMQAWFSLHPLSPAIIEVKALHHFDWFTKGKVPVLEAMEKDQKVRSQFRGGSSAIVANTTEKPQVIAAKLQTLSPKYNSVMNHIRIHLPELFPSLNKVVFLDDDIVIQTDLTPLWDIDMNGKVNGAVETCTGEDKFVMSKRLKSYLNFSHPLILKNFNPKECAWAYGMNIFDLEAWRKTNISFTYHHWVEQNIKSDLSLWQLGTLPPGLIAFHGHVHIIDPFWHMLGLGYQEDTSFADAESAGVIHFNGRAKPWLDIAFPQLKPLWTKYVNFSDKFIKSCHIKAS 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01118 534 Pfam Glycosyl transferase family 8 211 507 IPR002495 GO:0016757
Aip08g01118 534 SUPERFAMILY Nucleotide-diphospho-sugar transferases 209 531 IPR029044 -
Aip08g01118 534 PANTHER GALACTURONOSYLTRANSFERASE 12-RELATED 12 532 - -
Aip08g01118 534 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 12 532 IPR029993 GO:0047262
Aip08g01118 534 CDD GT8_like_1 208 520 - -
Aip08g01118 534 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 210 529 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01118 Aip-Chr8 15061022 15064513 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01118 1 534 Glycosyltransferase AT5G54690 80.748 0.0 894
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01118 K20867 - gmx:100812550 934.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01118 08 15061022 15064513 Aip08g01118 08 15061022 15064513 ECH