Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01117 ATGGGGATGAGGAGTGATTCACAGAAACAACAAGTTCTTCATCAGGGTGTTGGTGGTGGTGGTGCTGCTGCTGTTGGTAGAACCAATGGCTTTATTCCCAGCTCCTTTCGTGCTATCTCTAGCTACCTAAGGATTGTTTCCTCTGGAGCTTCAACTGTCGCCCGCTCGGCCGCATCGGTTGCTTCATCAATTGTTGATAGGGATGATGATGCTGACCATGATCAGGTAATCTGGGCGGGATTTGACAAGTTGGAGAGCAAGGGTGGAATCTTGCAGCAGGTACTTCTTCTAGGCTATCGTTCTGGCTTCCAGGTTTGGCATGTTGATGAATCAAACAATGTACGTGACGTGGTTTCCAGACATGATGGTCCTGTTTCTTTTATGCAAATGGTTCCAAATCCAATTGCATCAAAGAGATCAGAAGACAAGTTTGCAAATAGCCGCCCACTGCTGGTAGTTTGTACCGATGGATTCTTTGCCAGTGGTACCAATGTTCAGGATGGGTCAAATGCCCCTTACAATGGGGGGACTTCGAACTCACATGACCAAATGAATGGCAACTATCTGCCAACCACTGTTCAGTTTTATTCTATGAAATCCCATGCTTATGTCCATGTACTGAAATTTAGATCAGTTGTCTATTCGGTAAGGTGCAGTTCTCGAGTAATTGCTGTAGCTCAATCCACTCAGATACACTGTTTTGATGCTACATCTTTAGAAAGGGAATATACGTTACTTACCAATCCTATAGTCATGAGCTGTCCCGGTTCTGGTAGCATAGGCTACGGACCACTTGCAGTGGGTCCAAGATGGCTAGCATATAGTGGAAGCCCGGTTGTAGTCTCTGCCTCTGGGCATGTCAGCCCACAACAGCTGACACATTCTTCAAGCCTTCCTGGTTATTCTTCAAATGGGAGCTTAATTGCGCACTATGCCAGAGAGTCCAGCAAGCAGCTTGCTTCAGGAATTGTGACCCTTGGAGATATTGGGTACAAGAAACTTTCCAGATACTACTCTGATAACAATGGTTCATTACAATCTGTAAATTCTGGCCCAAAGGGCAATGGAATCACTAATGGCCATTCAACAGATGCCGATAACATTGGAATGGTCATTGTTAGAGATATTGTTACAAAAAACGTCATCACCCAATTCCGGGCCCACAAGAGTCCCATTTCTGCTCTATGTTTTGATCCTAGTGGCACCATATTAGTGACTGCTTCAGTCCAGGGGCATAATATCAATGTTTTTAAGATAGTTCCCGGACATGAAAATTCATCAGTATCTGACGCTGGTCTTTCCTATGTTCATCTATACAGGCTACAACGTGGCTTCACAAATGCGGTTATACAAGATATCAGTTTTAGCAATGATAGCAAGTGGATTATGATTAGTTCCTCAAGGGGCACTAGCCATCTATTTGCCATAAATCCTCAAGGAGGATATGTAGATATTCAATCTTATGATGATAATCCTATGCCCAAAAATAATGGAATGGGAGTTATGACTAATCAAGCAATGCGCAGGTCTCATAGTTCAGTAGTGCCTCAGCAGCAGAGCCTTATCGTCTCTGGGCCTCCAATCACACTTTCTGTAGTAAGCAGAATTAGGAATGGAGCTAATGGCTGGAGAGGAGCGGTAAGTGGTGCTGCTGCAGCTGCAGCTGGGAGGAAGAGTTTGCTCTCTGGTGCTATTGCTTCATCTTTCCGTAATGCCTTATATGTTGACGGGAACCATTCCAAGGCAAAGAATCATCTTTTGGTCTTTTCACCTACTGGGTCCATGATACAATATGCTTTGCGGACAATAAATGGTCAAGATTCGACCATTGTTTCAGGAATAACCCCGGCTTATGAATCCATTCCGCAAACTGAGGCAAGATTAGTAGTGGAAGCTATCCACAAGTGGAATATATGTCAGAGACATAGTCGGAGAGAAGATAATGTTGACATATATGGCGAGAGTGGAATTTCCGATAGCAACAAAATATATCCTGAGGAAGTGAAGGTGGACAACCTCGTCAGCCCTAAAATCAAGAATGGGGTCAAGAAAATGAATCTCTCTCTTGAGGAACAGCATCATTTGTATATTTCAGAAGCTGAATTGCAAATGCATCCTGCTCAGAGACCATTGTGGGCAAACCCAGAGATATATTTTCATTCAATATCAAAAGAATCTGCCATAATGAATGAAGCAGCATCTTCAGGAGGCGAATTTGAGATCGAAAAGCTTCCAAGTCGCATGATTGAATCTAGGTCGAAAGACTTGATTCCAATTTTTGACTATATACAGACCCCGAGAGTGCAACAAACAAGGACTACTGCTACAGATAACAAGACTAATGAACAACTGTCACGTCAAACTTCATCACTGTCTAATAATGGCAGGATTTCACCCGGTGCTGTTTTGGGATCTCCTGAATATGTTACCGATTCTGTTGGCGATGTTGCTGAATTTAAAAGCGAGTCTGAAGGAACCGAGTGGGATGCTCATTTTGCGCTGCCTGAAATGGGGGCCTTTGTAAATAGCAATGACACTGTCAAACCAAATACTCAGCATGAGATTGTAAATAATATAAAGGAGCATCTAAACATGGAGGCCCAGCTCATGTATGTAAATAGTAACACAAGGCCTCTGAATGAAGAATCATTTTAA 2655 0.432 MGMRSDSQKQQVLHQGVGGGGAAAVGRTNGFIPSSFRAISSYLRIVSSGASTVARSAASVASSIVDRDDDADHDQVIWAGFDKLESKGGILQQVLLLGYRSGFQVWHVDESNNVRDVVSRHDGPVSFMQMVPNPIASKRSEDKFANSRPLLVVCTDGFFASGTNVQDGSNAPYNGGTSNSHDQMNGNYLPTTVQFYSMKSHAYVHVLKFRSVVYSVRCSSRVIAVAQSTQIHCFDATSLEREYTLLTNPIVMSCPGSGSIGYGPLAVGPRWLAYSGSPVVVSASGHVSPQQLTHSSSLPGYSSNGSLIAHYARESSKQLASGIVTLGDIGYKKLSRYYSDNNGSLQSVNSGPKGNGITNGHSTDADNIGMVIVRDIVTKNVITQFRAHKSPISALCFDPSGTILVTASVQGHNINVFKIVPGHENSSVSDAGLSYVHLYRLQRGFTNAVIQDISFSNDSKWIMISSSRGTSHLFAINPQGGYVDIQSYDDNPMPKNNGMGVMTNQAMRRSHSSVVPQQQSLIVSGPPITLSVVSRIRNGANGWRGAVSGAAAAAAGRKSLLSGAIASSFRNALYVDGNHSKAKNHLLVFSPTGSMIQYALRTINGQDSTIVSGITPAYESIPQTEARLVVEAIHKWNICQRHSRREDNVDIYGESGISDSNKIYPEEVKVDNLVSPKIKNGVKKMNLSLEEQHHLYISEAELQMHPAQRPLWANPEIYFHSISKESAIMNEAASSGGEFEIEKLPSRMIESRSKDLIPIFDYIQTPRVQQTRTTATDNKTNEQLSRQTSSLSNNGRISPGAVLGSPEYVTDSVGDVAEFKSESEGTEWDAHFALPEMGAFVNSNDTVKPNTQHEIVNNIKEHLNMEAQLMYVNSNTRPLNEESF 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01117 884 MobiDBLite consensus disorder prediction 768 799 - -
Aip08g01117 884 PANTHER AUTOPHAGY-RELATED PROTEIN 18F 4 860 - -
Aip08g01117 884 SMART WD40_4 434 475 IPR001680 GO:0005515
Aip08g01117 884 SMART WD40_4 378 418 IPR001680 GO:0005515
Aip08g01117 884 Gene3D - 92 480 IPR015943 GO:0005515
Aip08g01117 884 SUPERFAMILY WD40 repeat-like 94 477 IPR036322 GO:0005515
Aip08g01117 884 Pfam Breast carcinoma amplified sequence 3 525 758 IPR022175 -
Aip08g01117 884 MobiDBLite consensus disorder prediction 768 804 - -
Aip08g01117 884 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 4 860 IPR045142 GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01117 Aip-Chr8 15027260 15033518 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01117 - - gmx:100784596 1278.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01117 08 15027260 15033518 Aip08g01117 08 15027260 15033518 ECH