Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01107 ATGGATTATGAACCTCCATTCCTAGAAACCTACAAGACCCTTTTGCAAGAAGAAGATTCAAACCGCAATAATGACTTGTTACTGGTGGAGAATTTTGATGATGAGATAGAGCTACCTTTGATTGATCTTAACCGGTTGAATGAAAATAATCTTGATGAGAGAGATGAGTGCATGGAAGAGATAAGTGATGCTGCAAGGAGATGGGGTTTCTTTCAGATTGTGAATCATGGTATTTCAAAGGATCTTCTTGGTATGATGCTGTTTGAGCAAATGAAACTGTTCTATCAACCTTTTGTGAAAAAATCTTCAGATAATTTTCTTGGTTTGCCTCCAAGAACTTATAGATGGGGAAACCCATCTGCTACTAATTTGAAGCAATTGTTATGGTCCGAAGCATTTCATTTTCCTATTTCAGATATATCAATGATGGACAACCAGCACAAAAGTCTCAGATGGAACATTGAAGCCCTTGCAGCAGCAGCAGTTACCCCACTAGCCCAATGCTTGGCAGAAACTTTGGCTTGCAAAATGAAGATGATTATGAAATCCAAGAATTATTTCAAAGAGAATTGTTTTCAAGAAAGTTCTATAATTAGACTGAATAGATATCCTCCATGTCCAAAACTATTATCTTCAAAGTTATATGGACTTATGCCCCACAATGACTCAAGTTTTCTTAGTATTGTTTATCAGGACCATGTAGGAGGATTGGAATTATTAAAAGATGGAAAATGGATTCGTGTGAAGCCTAATCCAGGAGCTCTGGTTATCAACATTGGAGATTTATTTCAGGCATTGAGCAATGGTATATACAAAAGTATAAAACACAGAGTGGTAGTTTCCCAAAAGGAAGAGAGGTACTCAGTAGCATTCTTCTATTGCCCTTTGTTGGAGACATTGATACAAAGTCATAGCCATACCAAGCCAGCTATGTACAAAAATTTCACTTTTAGAGAATATAGAGAGCAAAATGAGAAAGCTGTCAAACAAACTGGTGATAAAATCGGGCTCTCTAAATTTCTTTTATAG 1029 0.3654 MDYEPPFLETYKTLLQEEDSNRNNDLLLVENFDDEIELPLIDLNRLNENNLDERDECMEEISDAARRWGFFQIVNHGISKDLLGMMLFEQMKLFYQPFVKKSSDNFLGLPPRTYRWGNPSATNLKQLLWSEAFHFPISDISMMDNQHKSLRWNIEALAAAAVTPLAQCLAETLACKMKMIMKSKNYFKENCFQESSIIRLNRYPPCPKLLSSKLYGLMPHNDSSFLSIVYQDHVGGLELLKDGKWIRVKPNPGALVINIGDLFQALSNGIYKSIKHRVVVSQKEERYSVAFFYCPLLETLIQSHSHTKPAMYKNFTFREYREQNEKAVKQTGDKIGLSKFLL 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01107 342 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 193 295 IPR005123 -
Aip08g01107 342 Pfam 2OG-Fe(II) oxygenase superfamily 197 295 IPR044861 -
Aip08g01107 342 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 27 336 - -
Aip08g01107 342 Gene3D - 9 330 IPR027443 -
Aip08g01107 342 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 27 336 - -
Aip08g01107 342 Pfam non-haem dioxygenase in morphine synthesis N-terminal 38 136 IPR026992 -
Aip08g01107 342 SUPERFAMILY Clavaminate synthase-like 26 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01107 Aip-Chr8 14750485 14754500 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01107 35 322 Glycosyltransferase AT5G59530 28.981 2.80e-32 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01107 - K04125 lja:Lj0g3v0081939.2 417.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01107 08 14750485 14754500 Aip08g01107 08 14750485 14754500 ECH