Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01093 CCTGAGTGCATCAACGATGTTCCCGTTTCAAGATTTAAGATCAAGCCCGGTAAAACACTGAGTCCAAGAAAATGGCATGCTGCTTTTACTGAAGAAGGATATCTGGATATAGGAAAGATTCTAAGGCGAATCTACAGAGGGGGAATCCATCCATCAATTAGGGGAGAAGTTTGGGAATTTCTACTTGGTTGTTATGATCCAAAGAGTACATTTGATGAACGAGAACAAATAAGACAGCGTCGTAGGTTAGAATATGCTAGATGGAAGGAAGAATGTCGCCAAATGTTTCCTTTTGTTGGAAGTGGTAGATATATTTCATCTCCTGTAATTACCGATGATGGTCAACCGATTCAAGATCCATCAGTTCTTCTGGAATCAAATCCAGACAAGGGATTGGTTTTAGTTCCTCAAGATAATTATAGGTCTTCAAGCATAGATGCCAGAAATAATTTAGAAAAGGTGACAGACAAGAGAGTAATCCAGTGGCTGTTAACTCTTCATCAAATAGGTCTTGACGTGATTCGCACTGATAGGACATTGGTCTTTTATGAGAAGCAAGAGAACTTGTCAAAATTATGGGATATTCTTGCAGTTTATGCTTGGCTAGATAAAGATGTTGGCTATGGTCAAGGGATGAGTGACCTATGCTCACCTATGATAATTCTTCTTGAGGATGAAGCAGATGCATTTTGGTGCTTTGAGCGTCTAATGCGCAGACTTCGAGGTAATTTCAAGTGCACTGATCGTTCTGTTGGAGTGGAGACTCAACTAAGTAACTTGGCTTCAATTACTCAAGTATTAGATCCAAAACTTCATAAACATTTAGAGCAACTAGGTGGAGGTGATTATCTGTTTGCTTTTCGGATGCTAATGGTTCAGTTTCGTCGAGAATTTTCCTTTTGTGATTCACTATACCTTTGGGAGATGATGTGGGCTCTAGAGTATGATCCTGATTTGTTTTGGATGTACGAGGATGCTCAGAGAGCTCCTACAAGCGCCGAGAGCTCTAGAGGGAAGGTGAAGTCAATTAGACAATGTGGAAAGTATGAGCGAGAAAATATGAGAACAGGGGCAAAGAACTCCGAAACTCCTCTTCCCATATCGATTTTCCTTGCTGCTAGTGTGTTGAAAGATAAAAGTTCAAAGCTACTACATGAAGCACGGGGTCTGGATGATGTTGTGAAGATTTTGAATGACATGACTGGAAATCTAGATGCTAAAAAGGCTTGTTCCGGGGCTATGAAACTTCATAAAAAATATTTGAGAAAGGCCAAGAAAACGTAA 1284 0.4011 PECINDVPVSRFKIKPGKTLSPRKWHAAFTEEGYLDIGKILRRIYRGGIHPSIRGEVWEFLLGCYDPKSTFDEREQIRQRRRLEYARWKEECRQMFPFVGSGRYISSPVITDDGQPIQDPSVLLESNPDKGLVLVPQDNYRSSSIDARNNLEKVTDKRVIQWLLTLHQIGLDVIRTDRTLVFYEKQENLSKLWDILAVYAWLDKDVGYGQGMSDLCSPMIILLEDEADAFWCFERLMRRLRGNFKCTDRSVGVETQLSNLASITQVLDPKLHKHLEQLGGGDYLFAFRMLMVQFRREFSFCDSLYLWEMMWALEYDPDLFWMYEDAQRAPTSAESSRGKVKSIRQCGKYERENMRTGAKNSETPLPISIFLAASVLKDKSSKLLHEARGLDDVVKILNDMTGNLDAKKACSGAMKLHKKYLRKAKKT 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01093 427 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 145 244 - -
Aip08g01093 427 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 252 420 IPR035969 -
Aip08g01093 427 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 13 426 - -
Aip08g01093 427 PANTHER RAB-GTPASE-TBC DOMAIN-CONTAINING PROTEIN-RELATED 13 426 - -
Aip08g01093 427 SMART tbc_4 45 337 IPR000195 -
Aip08g01093 427 Gene3D - 250 427 - -
Aip08g01093 427 ProSiteProfiles TBC/rab GAP domain profile. 48 314 IPR000195 -
Aip08g01093 427 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 24 274 IPR035969 -
Aip08g01093 427 Pfam Rab-GTPase-TBC domain 144 312 IPR000195 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01093 Aip-Chr8 14479556 14484295 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01093 - - adu:107462412 806.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01093 08 14479556 14484295 Aip08g01093 08 14479556 14484295 ECH