Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00715 ATGGAGTTTCAGTCTCCTCCAATTCCAAAGCTCTACCTTCTTTTATGCTTATCTTTCATCCTCTTACTTTCTTCTTTTCACGCTCATGCTAGTGGTTACAACTTCAGATTCTGTGCTGAAGATGCAAACTATCCTGTAAAGATCTCCAGACTTGAAATAACACCAAATCCTATTGTGCGTGCAAGACGGGCTAAGTTTAAGATCTTCGCTGCTTCTGATCATGTTATCTGTGGTGGGAAGTGGGTAATAAAAGTTTCATATATGGGACTTATTGTCCATAAGAAAATGTATGATCTTTGTGAGGCAATGTCCTGTCCTGTTGATGCTACCAAATTTACTCTTTCTCGCACCCAAAGGATGCCCTTATTTGCCCCACAGGGCATCTACACCGTCGAGATATCATTAAGGAACAGAATAAATGAACCATTCACTTGTATCACCTTTAATTTGAAAATTGTTTCTACATTTTTGGGATCTAGCTAG 483 0.3913 MEFQSPPIPKLYLLLCLSFILLLSSFHAHASGYNFRFCAEDANYPVKISRLEITPNPIVRARRAKFKIFAASDHVICGGKWVIKVSYMGLIVHKKMYDLCEAMSCPVDATKFTLSRTQRMPLFAPQGIYTVEISLRNRINEPFTCITFNLKIVSTFLGSS 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00715 160 Pfam ML domain 33 152 IPR003172 -
Aip08g00715 160 PANTHER LEGUMINOSIN GROUP578 SECRETED PEPTIDE 11 153 - -
Aip08g00715 160 SMART pgtp_13 35 150 IPR003172 -
Aip08g00715 160 Gene3D - 34 156 - -
Aip08g00715 160 SUPERFAMILY E set domains 33 153 IPR014756 -
Aip08g00715 160 PANTHER NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATED 11 153 IPR039670 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00715 Aip-Chr8 6885709 6888094 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00715 - - adu:107461992 301.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00715 08 6885709 6888094 Aip08g00715 08 6885709 6888094 ECH
Aip08g00715 08 6885709 6888094 Aip03g01471 03 16077215 16081446 PCT