Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00614 ATGACCACCCTAACGCAGCCACCTTCCAATGCTCTCAGTCTCAGTTACCTCCTAAAACAGCATTCCAAACGGCCCGGCCCGAACCGATTAACTGTTAAATGCGTTTACGCCTTCGAACCCACCAGCTTCGGAATCGGCTCCAACCGAGTGGACTGGCAGAGCTCCTGCGCCATTTTATCCAGCAAAGTCTTTTCGGAGGAAAAATCTTCTGCTTCCTCTAATTCCACCGGAAACAACAACTCTGCCGCTGATAACATCGCCGCTGTTAACGGCCACAAAACCGCTGTTACGGACCTTAATCTCGTCCCAATTAACGGCAGTGCAGACAGCGCCAAGCCGCTCCCTCCCAAGCCGCTAACGATTTCTGACCTCTCGCCGGCTCCAATGCACGGTTCGCAGCTTCGCGTTGCGTACCAAGGCGTTCCCGGCGCATACTCCGAGGCCGCCGCCGGAAAAGCTTACCCTAACTGTGAGGCCATACCGTGCGACCAGTTTGAGGTGGCGTTCCAGGCAGTGGAGCTCTGGATTGCCGACCGCGCCGTACTCCCGGTTGAAAACTCCCTTGGCGGATCGATCCACCGGAACTACGATCTCCTCCTCCGCCACCGCCTCCACATCGTTGGCGAGGTACAGCTCCCTGTCCACCACTGCCTCCTCGCTCTCCCCGGCGTACGAAAGGAGTACCTCAGCCGCGTAATCTCGCACCCTCAAGCTCTAGCTCAGTGTGAGCACACTCTCACAAAGCTCGGCCTCAACGTGGCTCGCGAGGCCGTCGACGACACCGCCGGCGCCGCAGAGTTCGTGGCAGTCAACTGCCTCCGCGACACGGCTGCAATCGCGAGCGCTCGCGCGGCAGAGCTGTATGGACTCCAGGTTTTAGCGGATGGGATCCAAGACGACCCGAGCAACGTAACCCGATTCGTGATGCTGGCACGAGAACCGATAATTCCCCGTACAGATAGGCCGTTCAAAACGAGCATTGTTTTTGCGCACGATAAGGGCACTTCGGTACTTTTCAAGGTGCTATCGGCGTTCGCCTTCAGGAACATAAGCTTGACGAAGATTGAGTCGCGGCCGCACAGGAACCGTCCGATCAGACTCGTGGATGATGCGAACGTTGGAACGGCCAAACACTTTGAGTATCTATTCTACGTTGATTTTGAGGCGTCCATGGCAGACGTTAGGGCGCAGAACGCCTTGGCAGAGGTGCAGGAATTCACCTCTTTCTTGAGGGTCTTGGGTAGTTATCCCATGGACATGACCCCTTGGACACCCTCTTCCAGAGGAAATTAG 1293 0.5669 MTTLTQPPSNALSLSYLLKQHSKRPGPNRLTVKCVYAFEPTSFGIGSNRVDWQSSCAILSSKVFSEEKSSASSNSTGNNNSAADNIAAVNGHKTAVTDLNLVPINGSADSAKPLPPKPLTISDLSPAPMHGSQLRVAYQGVPGAYSEAAAGKAYPNCEAIPCDQFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRKEYLSRVISHPQALAQCEHTLTKLGLNVAREAVDDTAGAAEFVAVNCLRDTAAIASARAAELYGLQVLADGIQDDPSNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYLFYVDFEASMADVRAQNALAEVQEFTSFLRVLGSYPMDMTPWTPSSRGN 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00614 430 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 18 427 - -
Aip08g00614 430 Gene3D - 130 218 - -
Aip08g00614 430 SUPERFAMILY ACT-like 307 419 IPR045865 -
Aip08g00614 430 Pfam Prephenate dehydratase 136 314 IPR001086 GO:0004664|GO:0009094
Aip08g00614 430 CDD ACT_CM-PDT 324 417 - -
Aip08g00614 430 ProSitePatterns Prephenate dehydratase signature 1. 288 310 IPR018528 GO:0004664|GO:0009094
Aip08g00614 430 Gene3D - 319 420 - -
Aip08g00614 430 ProSiteProfiles ACT domain profile. 326 417 IPR002912 -
Aip08g00614 430 ProSitePatterns Prephenate dehydratase signature 2. 352 359 IPR018528 GO:0004664|GO:0009094
Aip08g00614 430 PANTHER AROGENATE DEHYDRATASE 18 427 - -
Aip08g00614 430 Gene3D - 219 300 - -
Aip08g00614 430 CDD PBP2_Ct-PDT_like 135 314 - -
Aip08g00614 430 ProSiteProfiles Prephenate dehydratase domain profile. 135 312 IPR001086 GO:0004664|GO:0009094
Aip08g00614 430 SUPERFAMILY Periplasmic binding protein-like II 135 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00614 Aip-Chr8 5541919 5543477 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00614 K05359 - gmx:100797636 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00614 08 5541919 5543477 Aip08g00614 08 5541919 5543477 ECH
Aip08g00614 08 5541919 5543477 Aip03g00248 03 2442068 2443888 PCT