Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00487 ATGCAGATGCAAACCCCAAACACAAGAAATGGCTCCTCTGAGGTGTCTCGGAAGGTGTCCCCTCGCGGCCGCGGCATGCGCCAGCTCAGGCCTTCTGCGCTGTACATTGATTCTGCATCAACATTAAATCAAGTTCATAGAACAACATCAAAGGATAGAAGCCCTAAAGTCATTGAAAGAAGATCACCTAGAAGCCCTGCTCCTGAGAGGAAAAGGCCAAGCAGAATACCTGAATTGGAATCTCAGGTTTCTCATCTGAGAGAGGATTTGAAGAAAGTGAGGGAGCAGCTAAGTTTATCTGAATCATGCAAGAAACAAGCTCAACAAGAAGCTGAGGAATCCAAGCAAAAACTCTTTGCGTTGTCTCTCAAACTTGAAGAATCACAGCAGCAAGTTCTGAGCCTCACTTCTGCCAATCTTGAAGATTCCCTTACATCTTCCATGATTGAAATTTCTCATTGTGAAAACTCACAGACACAGTTTCCAGAATCATCAGATTTGGAACTACTAAACCTGAAACAAAACTTGGCAGAATCTCTTTGTATTGTGAAGAACATGAAAAACCAGCTCAAGGATTGCAAAGAGTCATCTCAGGCAGAACCTTTGGTTGATGAGACTTTGCGAAAACTCGAGGCTGCGAAAAGAACTGTGGAGTTCTTGAGGGCTGATGCTGCTAAATCTGCTACAGAAATAGACCCATCTAGAACCGGAAACTCCCTCGATTCGCATGTAAGCAAACTCGCAACCGGCCTCATTAGTAGCAAAATTGTCCACAATGGAAATCTTGTTGATGATCATAAGCATAAGCATGAAGCTGAAAAATTGGAAAAGCAAGAGGGTGCTGATCAAATTGGTTCTGAAATTCAGTTTCTCAAGTCTGAGGTAGAAAAACTGAGGTGTGCCATGGAGACTGCTGAGACTAAATACCATGAAGAACAGATTCGGAGCACGGTTCACATCAGGAACGCATATGAATTAATGGAACAGATGAAATTAGAATCAAGTAAGAGGGAGTCTCAATTAGAGGCTGAACTTAGAAGAAAGAAAGCTGAGATTGAAGATTTGAAGGGTAACTTGTTGGACAAGGAAACAGAGTTGCAGTGCATTGTGGAGGAGAATGAGAAGCTGAATGCAAGGATTGAAATGAACTTGTCATCACAAAGAGAACATGAAAATGAACTCAAGATGGAGATTCAAAGATTGCATGAATGTGTTGCTGAAATGAAGGCAGAGATGATGGACAAGGAGACGACACTTGAGAGCATATCCGAAGAAAATGAAATTCTGAAGAATATGGAATTCAATAAGGTACTGAGTGAAAGTGTGGCTGCAGAAATTGAGGCAGCTAAGGCCGTGGAACGCGTGGCGGCCGTGAAGCTTGGGATTGCAATGGAGGAGGCAGACCGGAGCAACCAGAAAGCCGCGAGGATCGCGGAGCAGCTGGAAGAAGCACAAGCATTGAAGTCAGAAATGGAGGCAGAACTTAGAAGGCTTAAGGTACAGTGTGATCAATGGAGAAAGGCTGCAGAAACTGCTGCTTCTCTGCTTTCAACAGGAAAGGGGAAACTCACTGAGAGATCTTTGTCTCTTGACAATAAATACAATATCCCTTTGATGAATAACAAGTATGAGCCTTGTTGTGATGATATCATCATTGATGATGATGATGATTTCCAGAGAAAGAAATATGGTAACATGCTTAAGAAGATTGGGATCTTGTGGAAGAAGCCTCACAAATAA 1740 0.4276 MQMQTPNTRNGSSEVSRKVSPRGRGMRQLRPSALYIDSASTLNQVHRTTSKDRSPKVIERRSPRSPAPERKRPSRIPELESQVSHLREDLKKVREQLSLSESCKKQAQQEAEESKQKLFALSLKLEESQQQVLSLTSANLEDSLTSSMIEISHCENSQTQFPESSDLELLNLKQNLAESLCIVKNMKNQLKDCKESSQAEPLVDETLRKLEAAKRTVEFLRADAAKSATEIDPSRTGNSLDSHVSKLATGLISSKIVHNGNLVDDHKHKHEAEKLEKQEGADQIGSEIQFLKSEVEKLRCAMETAETKYHEEQIRSTVHIRNAYELMEQMKLESSKRESQLEAELRRKKAEIEDLKGNLLDKETELQCIVEENEKLNARIEMNLSSQREHENELKMEIQRLHECVAEMKAEMMDKETTLESISEENEILKNMEFNKVLSESVAAEIEAAKAVERVAAVKLGIAMEEADRSNQKAARIAEQLEEAQALKSEMEAELRRLKVQCDQWRKAAETAASLLSTGKGKLTERSLSLDNKYNIPLMNNKYEPCCDDIIIDDDDDFQRKKYGNMLKKIGILWKKPHK 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00487 579 Coils Coil 281 315 - -
Aip08g00487 579 MobiDBLite consensus disorder prediction 1 80 - -
Aip08g00487 579 Coils Coil 464 508 - -
Aip08g00487 579 Coils Coil 76 131 - -
Aip08g00487 579 Coils Coil 391 432 - -
Aip08g00487 579 Coils Coil 203 230 - -
Aip08g00487 579 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 3 3 141 - -
Aip08g00487 579 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 3 143 579 - -
Aip08g00487 579 MobiDBLite consensus disorder prediction 49 80 - -
Aip08g00487 579 MobiDBLite consensus disorder prediction 1 17 - -
Aip08g00487 579 MobiDBLite consensus disorder prediction 34 48 - -
Aip08g00487 579 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 2, CHLOROPLASTIC-RELATED 143 579 IPR029688 -
Aip08g00487 579 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 2, CHLOROPLASTIC-RELATED 3 141 IPR029688 -
Aip08g00487 579 Coils Coil 169 189 - -
Aip08g00487 579 Coils Coil 338 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00487 Aip-Chr8 3838634 3843714 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00487 - - aip:107613971 1054.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00487 08 3838634 3843714 Aip08g00487 08 3838634 3843714 ECH
Aip08g00487 08 3838634 3843714 Aip03g00395 03 3787157 3794526 PCT