Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00429 ATGGGAGACATGGTGGACTATTCTAATTCTAACATGACCAGGAACCCCAAACAAGGCAGTGTTGCAACTGGGAAAAAATCATATAGAAAATCACTGATTTTGTCTCGCCCTAAATCTGTTGTGCTGAGATATCATCAGCACCTTGTTTCACTGATTGATGGTGACTTTGGAACCAGTGCCGTCGGCCGCATCACAGTTTTTGCGCTTAAAGTTGCTGCTTTAGAGATTGTAAGGAGGTTCTCCAAAAGCAAATGTCCATTTGTATGGAAAGGCCTTCAGGCACTCCAGATACTCTGTTATCCGCCTTTCCAATGGATTCAGAGATGGGCACCCTTTAAAGGTTTAGTGGAAAGTATGCAGGTCCTATCAAGACCACTACTAGCCCTTTCAATTGCAACAATTTTCTCTGACCAATCAGAATTAAGTGATGGAAAGTCAGATTGTGTTACTGATTCACATAGTGATTTAGTAAAATCCTCAGAATTATCTCCTGTGCAGGCTGATATGAATACAAGTCAGTGCTCGACAGATTCCAAAATTTTAGAATCTGAATATTGGTTGTCTCAACTCTTTCAAGAGCTTGAAAGTCAAGGGATTTGTTTGCCAGAAAGAATCAATAATGATGAGCTCCGAAGATTTTATGCAGCTTCTAATAATGACTTTTCATGCTTCCTTACCTCAATCAAAAAGACCGTACGTTGGCGAGAGGCTTACAGAATTCTTACTGAAGAAGAGCTGGAAAAGTGGTCAAAAGTTGTGTTTTGGCATGGATATGATGTGATGCACAGACCTTGCCTCATTGTAAAGCTTGGGCTAGCTTGCAGTACACTGGCATCTGAAGATAGACCTCGATTTGCTCAGGCAGTGGTATCACATGTAGAACATGGAATCGTGCAGTTGGTTGATGCAGACAATCCCCAAATTACTGTCTTGGTGGACTGTGAAGGGTTATCTCCATTGAAAATTCCCATGCAAATGATGAAATCTTGTTGTTCGCTGCTGCAAGAGCACTTCCCAAATCGTCTTGGTTGTTTGTTTGTCATACGACTCCCAGAAGTTCTTAATTTTACTGCCCAGAGCTTTATCCAGAGTTTGGAGCCTACAACTCGGAAAAAGTTGAAAATGGAAGGGAAGATGTATCATAAGGTTCTTACTGATAATCTTCCAGCACTGCCATCATATCTCGGAGGCTGCTGCACTTGCTCAGAATGCTCTGAAATTGGCAATGGTAGAATGCTGCAACCTCATACAGCAGGGACCAGCAGGGGAGATAATGTGGGAGGTATTAGTGATAGTGACAATGAGGATTCAACATCATTGCATTTGCATCGTTCCAATGAATCCGAAGATCATTCGTTTGGTAACTATGAGCAGTTGTTGAGAACCATTCTCATAGGTTTTCTCATATTTTGGGTTTTCATATCTCTTGGATTTGTTATGTATGATGCCGGTAGTCACCATTTCCTCTCATCATAA 1476 0.4146 MGDMVDYSNSNMTRNPKQGSVATGKKSYRKSLILSRPKSVVLRYHQHLVSLIDGDFGTSAVGRITVFALKVAALEIVRRFSKSKCPFVWKGLQALQILCYPPFQWIQRWAPFKGLVESMQVLSRPLLALSIATIFSDQSELSDGKSDCVTDSHSDLVKSSELSPVQADMNTSQCSTDSKILESEYWLSQLFQELESQGICLPERINNDELRRFYAASNNDFSCFLTSIKKTVRWREAYRILTEEELEKWSKVVFWHGYDVMHRPCLIVKLGLACSTLASEDRPRFAQAVVSHVEHGIVQLVDADNPQITVLVDCEGLSPLKIPMQMMKSCCSLLQEHFPNRLGCLFVIRLPEVLNFTAQSFIQSLEPTTRKKLKMEGKMYHKVLTDNLPALPSYLGGCCTCSECSEIGNGRMLQPHTAGTSRGDNVGGISDSDNEDSTSLHLHRSNESEDHSFGNYEQLLRTILIGFLIFWVFISLGFVMYDAGSHHFLSS 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00429 491 MobiDBLite consensus disorder prediction 1 24 - -
Aip08g00429 491 SMART sec14_4 247 400 IPR001251 -
Aip08g00429 491 MobiDBLite consensus disorder prediction 415 449 - -
Aip08g00429 491 MobiDBLite consensus disorder prediction 415 435 - -
Aip08g00429 491 CDD SEC14 243 397 IPR001251 -
Aip08g00429 491 Gene3D - 180 421 IPR036865 -
Aip08g00429 491 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 243 403 IPR001251 -
Aip08g00429 491 SUPERFAMILY CRAL/TRIO domain 251 402 IPR036865 -
Aip08g00429 491 Pfam CRAL/TRIO domain 250 397 IPR001251 -
Aip08g00429 491 PANTHER SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN 10 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00429 Aip-Chr8 3285870 3289119 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00429 - - gmx:100786215 669.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00429 08 3285870 3289119 Aip08g00429 08 3285870 3289119 ECH
Aip08g00429 08 3285870 3289119 Aip03g00459 03 4505119 4507453 PCT