Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00352 ATGGGCGGCGTTTCTTGTACACGACAGACTACGCCAGCAGCTGCAGCATTAGCTGTAGTACTGCTCGTCATGTGCTCCACCGAGACCCGCCGCGTCGCCGACATCAACCTCCGCGGCGAGTCGGAGGAGCCGATATTCGAGAGAGCACACCGAACTGGCTACATGACCGGATACATCTCTCCGAAGATCTGCAAGCTCAAGCGTCTCTCCAGCATCACCATCGCCGACTGGAAGGGAATCTCCGGCGAGATTCCTCGCTGCATCACCTCTTTACCGTTCCTCCGCATCGTCGACCTAATCGGAAACCAAATCTCCGGCACAATCCCCTCCGACATTGGCAGACTCCACCGCCTCACCGTCCTCAACGTCGCCGACAACGCAATCTCCGGCTGGATCCCTCCGTCGCTAACGAACGTCACAAGCCTCATGCATCTCGACCTCCGTAACAACAAGATCTCCGGGCCTATCCCACGGGCCTTCGGAAACCTTCAAATGCTTAGCCGGGCCTTACTAAGTGGAAACCAGATCAGCGGGCCCATTCCTGAATCACTCACTCGAATTTACCGCTTAGCGGATCTAGATCTATCACGAAACCTAATTTCCGGGCCCATACCCTCATCGCTGGGTAAAATGGCGGTTCTCTCCACATTAAACTTGGATATGAACAGGCTTTCGGGGGCCATACCCGTGAGCCTGTTTAGTTCTGGAATAAGTGACTTAAACATAAGTCGTAACAGCTTAGATGGTAAAATCCCAGACGCCTTCGGTGTTAGGTCTTACTTCACCGTTCTTGATTTGTCTTACAATAAGCTTAGTGGGCCCATTCCGAAATCCATAACTTCAGCTTCCTATGTGGGCCACTTGGATTTAAGTCACAACCATCTCTGCGGCCCAATTCCGACGGGCTCACCGTTCGATCACCTCGAAGCGTCGTCGTTTGTGTTCAACGATTGCCTCTGCGGAAAGCCCCTCAACAAGCCTTGTTAA 987 0.5319 MGGVSCTRQTTPAAAALAVVLLVMCSTETRRVADINLRGESEEPIFERAHRTGYMTGYISPKICKLKRLSSITIADWKGISGEIPRCITSLPFLRIVDLIGNQISGTIPSDIGRLHRLTVLNVADNAISGWIPPSLTNVTSLMHLDLRNNKISGPIPRAFGNLQMLSRALLSGNQISGPIPESLTRIYRLADLDLSRNLISGPIPSSLGKMAVLSTLNLDMNRLSGAIPVSLFSSGISDLNISRNSLDGKIPDAFGVRSYFTVLDLSYNKLSGPIPKSITSASYVGHLDLSHNHLCGPIPTGSPFDHLEASSFVFNDCLCGKPLNKPC 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00352 328 SUPERFAMILY L domain-like 58 324 - -
Aip08g00352 328 Pfam Leucine rich repeat 117 176 IPR001611 GO:0005515
Aip08g00352 328 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 23 328 - -
Aip08g00352 328 Gene3D Ribonuclease Inhibitor 51 328 IPR032675 -
Aip08g00352 328 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 23 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00352 Aip-Chr8 2657094 2658309 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00352 25 328 Receptor kinase-like Gene Family AT5G46330 35.380 4.18e-47 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00352 - - gmx:100804739 521.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00352 08 2657094 2658309 Aip08g00352 08 2657094 2658309 ECH
Aip08g00352 08 2657094 2658309 Aip03g00599 03 5845875 5847129 ECH
Aip08g00352 08 2657094 2658309 Aip03g00599 03 5845875 5847129 PCT