Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00261 ATGTACCTGAGAGGAAGTTGGCGTGCTAATAATCATTGGGGTTCATCGGTTTCTAAGAGTAGAATCCACAGCAAGAGGGATAGAAAGTTGAATGCTCTAGTATCAAAGCAAGATCTTCATCAATCTTCAAGCTCGTTACCAAGGAGAAGGAAGTTACAATATCTAAAGCTACCACCTACATTGTTCTCCTTCCAATTTCTTGAATCCGTCATGAAATTGCAAGTGAAAGACGTGTGCAAGAAGCAACAACACCACCCCATTGATTTGTTACCGAAACCAGAAGCATGGTTATTGTCTTTTGAAGTTCTTCACGTGGCTGCAGTGAAGCTCCAGAAAGTTTACAGGAGTTACAGGACAAGAAGAAATCTCGCAGACTGCGCAATCGTCTGCGAGGAGCTTTGGTTTGTTCATCAATCTCCCATGTCTATGGCTATGCTTGTTTTAATTCTTTCTTGTTTTTCGAATTCAGCGAATTTTCGAGGTTCTGTTTTCAGGTGGAAGGCTTCTGAATTTGCCGATAAAACAGAATCAGCTATATCAAAATGGAGAAGAGCTAGAGCCATGGCTGATGAGATGGGAAAAGAGTTTTCCAAAGATTATAAGGCGCAGAATTTGGCTCTAAGTCACTGGCTTGAAGCCATTGATCCACGTCATCGTTACGGGCACAACTTGCACTTTTATTACAACATCTGGTTTTGGAGCAAGAGCTCCCAGCCCTTTTTTTACTGGCTGGATGTTGGAGATGGCAAGGAAGTTAACCTTGAAATATGCTTAAGAAAGAACTTGCAAAGGCAACGAATTACTTACCTTGGACCTGAGGAGAGGGAAGCATATGAGGTGATGATTGTGGAAGGAGGAAAACTGGTTTATAAGCAAAGCCAGAAACCTGTTCATACCACTGATGGGTCTAAGTGGATTTTTGTTCTTAGTCCATCAAGAGTTTTGTATGTTGGTCAGAAAAAGAAAGGAGAATTCCAACATTCTAGTTTTCTAGCTGGAGCTGTTACCACTTCTTCTGGAAGATTAGTTGCCCATAATGGAGTCATTGATGCTATTTGGCCTTACAGTGGTCATTACCGTCCAACAGCAAAGAATTTCTTGGAATTCTTACATTTCTTGGAAGCTCACCATGTTGATTTGACTAATGTCAAGAAATATCCAGTAGACGACGACGTGCCAAGTGAAATGGGATCAAGTGAGTCGCCAACAAATGAAAACTCGGCAATAATACAAGCAAGCAAGTGGAGCACTGGAGTTGGTCCAAGAATTGGTTGCATGACAGAGTACCCTAAAGAGCTGCAAGTGATGGCACTTGAGCACCTTGGAAGATTTGTTGGCATGGCACCCATTGCATCTCCAAGACCTACTCTCAAACTCCACCTCTCCCCTAAACTTGTCTACATGGGAATAGAATGA 1416 0.4216 MYLRGSWRANNHWGSSVSKSRIHSKRDRKLNALVSKQDLHQSSSSLPRRRKLQYLKLPPTLFSFQFLESVMKLQVKDVCKKQQHHPIDLLPKPEAWLLSFEVLHVAAVKLQKVYRSYRTRRNLADCAIVCEELWFVHQSPMSMAMLVLILSCFSNSANFRGSVFRWKASEFADKTESAISKWRRARAMADEMGKEFSKDYKAQNLALSHWLEAIDPRHRYGHNLHFYYNIWFWSKSSQPFFYWLDVGDGKEVNLEICLRKNLQRQRITYLGPEEREAYEVMIVEGGKLVYKQSQKPVHTTDGSKWIFVLSPSRVLYVGQKKKGEFQHSSFLAGAVTTSSGRLVAHNGVIDAIWPYSGHYRPTAKNFLEFLHFLEAHHVDLTNVKKYPVDDDVPSEMGSSESPTNENSAIIQASKWSTGVGPRIGCMTEYPKELQVMALEHLGRFVGMAPIASPRPTLKLHLSPKLVYMGIE 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00261 471 PANTHER CALMODULIN-BINDING FAMILY PROTEIN 408 470 - -
Aip08g00261 471 PANTHER CALMODULIN-BINDING FAMILY PROTEIN 31 396 - -
Aip08g00261 471 ProSiteProfiles IQ motif profile. 103 132 IPR000048 GO:0005515
Aip08g00261 471 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3 408 470 IPR044159 -
Aip08g00261 471 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3 31 396 IPR044159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00261 Aip-Chr8 1909021 1915501 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00261 - - adu:107461326 887.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00261 08 1909021 1915501 Aip08g00261 08 1909021 1915501 ECH
Aip09g00700 09 8457483 8462600 Aip08g00261 08 1909021 1915501 PCT