Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00233 ATGACGACGTACGGAACCATCCCAACCTCCTCTTCTCCCTCCTCAAATCTGGAGTTCCTCTCACGCGCCAAGCAGCGGATCAAGGAGGGTCTAGGCACGCGCCGCCCATGGAAGCTCATGTTCAACCTCCACTCCTTCGGTCTCCCATCTGGATTCTCAGACGCGCTCTCGCGCGTGCGCACCAACATCGCTTACTTCCAGATGAACTACGCCATCGTCGTTCTCCTTGTTCTCTTCCTCAGCCTCCTATGGCACCCGATCTCGCTCATCGTCTTCGTCGTTCTCATGGCCGCGTGGCTCTTCCTCTACTTCCTCCGCGACGAGCCACTCACGATCTTTGGCCGCCTCATCAGTGACCGCGTCATCCTCATCGTCATGTCAGTGCTCACCGTCGTGCTCTTGCTGCTCACCGGTGCCACCGCAAACATACTCATCGCGCTCCTCGTCGGTGTGGTTCTGGTGGTGGTGCACGCCGCGCTGCGCCGGACGGACGACTTGTTCTTTGATGAGGAGGAGGCTGCTGGATTGGTACAACACCACCACCATCATCACCCTGGTGTTGCTTCTTCCTCTTGA 576 0.5833 MTTYGTIPTSSSPSSNLEFLSRAKQRIKEGLGTRRPWKLMFNLHSFGLPSGFSDALSRVRTNIAYFQMNYAIVVLLVLFLSLLWHPISLIVFVVLMAAWLFLYFLRDEPLTIFGRLISDRVILIVMSVLTVVLLLLTGATANILIALLVGVVLVVVHAALRRTDDLFFDEEEAAGLVQHHHHHHPGVASSS 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00233 191 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 1 178 IPR004895 -
Aip08g00233 191 Pfam PRA1 family protein 31 171 IPR004895 -
Aip08g00233 191 PANTHER PRA1 FAMILY PROTEIN F2 1 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00233 Aip-Chr8 1674829 1675776 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00233 K20359 - gmx:100526887 238.424
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00233 08 1674829 1675776 Aip08g00233 08 1674829 1675776 ECH
Aip08g00233 08 1674829 1675776 Aip09g00616 09 7259250 7260067 PCT