Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00228 ATGGCTGGGATTGTTGTTGTTTTGGACTTCGACAAGACCATTATTGAATGTGACAGTGACAATTGGGTTGTTGATGAATTGGGTTTCACTGATCTGTTTAATCAGCTTCTTCCCACCATGCCTTGGAACACTCTCATGGACACCATGATGATGGAGCTTCATGCTAATGGGAAAACCATTGATGAGATTGTGAAGGTTCTGCAGAGAATTCCTATACATCCCAGAGTTGTCCCTGCCATTAAAACCGCCTATGCTATGGGGTGTGACTTGAGGATTGTAAGTGATGCAAACACACTTTTTATTGACACTATATTGAAGAACTTAGGAATAAGAGAATGCTTCTCTGAGATCAACACAAACCCTTCCTATATTACTGAAGAGGGAAGGTTAAGAGTTTTGCCTTATCATGACTCCAACAAATCTCACCATGGATGTAGCCTCTGCCCTCCAAACATGTGCAAGGGTCTAATCATAGAGAGAATCCAAGATTCAATAACATGTGGTGAAGAGAAGAAGAGGTTCATCTATCTTGGGGATGGAAGTGGGGACTATTGCCCAAGCTTGAGGCTGAAGGAAAAGGACTTTATGATGCCAAGGAAGAACTTCCCAGTTTGGGAGCTGATATGTAAAGATCCTTTGCTTGTTAAGGCCGAAATCCATGAATGGAGTGATGGAGAAGACATGGAACGTATTTTGCTGCATTTGATCAACAAGATCTCTATGGAGGAATTCATTTCAGCTGATTGCAAGAGGCAGAGTTTCTCAGTTTCTTCTCATGAGTCTTTACCTCATGTTCTCCCTGTTAGGCAGTAA 813 0.4194 MAGIVVVLDFDKTIIECDSDNWVVDELGFTDLFNQLLPTMPWNTLMDTMMMELHANGKTIDEIVKVLQRIPIHPRVVPAIKTAYAMGCDLRIVSDANTLFIDTILKNLGIRECFSEINTNPSYITEEGRLRVLPYHDSNKSHHGCSLCPPNMCKGLIIERIQDSITCGEEKKRFIYLGDGSGDYCPSLRLKEKDFMMPRKNFPVWELICKDPLLVKAEIHEWSDGEDMERILLHLINKISMEEFISADCKRQSFSVSSHESLPHVLPVRQ 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00228 270 Pfam Putative Phosphatase 4 236 IPR016965 GO:0016791
Aip08g00228 270 PANTHER INORGANIC PYROPHOSPHATASE 1 268 - -
Aip08g00228 270 TIGRFAM DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 4 200 IPR006384 GO:0016791
Aip08g00228 270 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 268 IPR016965 GO:0016791
Aip08g00228 270 SUPERFAMILY HAD-like 5 199 IPR036412 -
Aip08g00228 270 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 188 - -
Aip08g00228 270 Gene3D - 2 190 IPR023214 -
Aip08g00228 270 PIRSF PLP_phosphatas_PHOSPHO2 1 240 IPR016965 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00228 Aip-Chr8 1632036 1633592 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00228 K13248 - gmx:100782134 451.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00598 09 6676734 6681507 Aip08g00228 08 1632036 1633592 ECH
Aip08g00228 08 1632036 1633592 Aip08g00228 08 1632036 1633592 ECH
Aip08g00228 08 1632036 1633592 Aip09g00603 09 6745699 6748915 PCT