Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00190 ATGACTGTCAAAGAAACTTTCGATTTTTCGGCTAGATGCCAGGGGGTTGGAACTCGATATGACTTATTAGCCGAGCTTGCTAGAAGGGAAAAGGATGCTGGCATATTTCCAGAGGCAGAACTTGATCTTTTCATGAAGGCTACAGCAATGGAAGGAATGAAAAGTAATCTAATTACTGACTACACTCTCAAAATACTGGGGCTTGATATTTGCAAAGATACCGTTGTTGGTGACGATATGCGCAGAGGTATATCTGGTGGACAAAGGAAGCGTGTAACAACAGGAGAAATGATTGTTGGGCCAACAAAAACACTTTTCATGGATGAAATATCAACTGGTCTTGATAGTTCTACAACATATCAGATAGTGAAATGCTTGCAGCAAGTTGTGCATATCACTGAAGCAACCATCCTCATGTCCCTCCTTCAACCTGCTCCAGAGACATTCGAACTCTTTGATGATATCTTCTTAATAGCAGAGGGTCAAGTTGTTTATGAAGGTCCACGTGAGCATATTGTTGAGTTCTTTGAGTCATGTGGGTTTAGATGCCCTGAGAGAAAAGGAACTGCTGATTTCTTACAAGAGGTTACCTCAAAGAAGGATCAAGAACAATATTGGGCAGACAAACACAGACCATACAGATATGTAACAGTGACTGAGTTTGCAAACAAGTTCAAGCAATTCCATGTCGGAATGCAACTCGAGCGAGAACTAGCTGTTCCATTCGACAAGTCAGCAGGACATAGAGCAGCTCTTGTTTTCAAGAAGTACACAGTTCCAAGAATGAAGCTTCTCAAGGCATGTTGGGACAAGGAGTGGCTATTGATCAAGAGGAATGCTTTTGTTTATATCTTCAAAACCGGTCAAATAGTCATTCTTTCAATTATATCTGCAACTGTCTTCTTAAGAACACATATGCACCAGAGGAATGTAAGTGATGGAACTCTTTACATTGGTGGAATCTTGTTCACATTGATCATGAACATGTTCAATGGATTTGCTGAGCTGTCACTCACCATTGCAAGGCTACCAACCTTTTACAAGCACAGAGACCACCTTTTTCATCCTACTTGGGCTTATACACTCCCTAATTTCCTCCTAAGACTCCCCATTTCTATTGTTGAGACTGTTGTTTGGGTTGGTATTACATACTACACCATAGGATTTGCACCTGAAGCTAGCAGGTTCTTCAAGCACTTGTTGTTGACCTTTGTTGTTCAACAAATGGCAGCTGGGTTGTTCAGGCTTATCTCAGGAGTGTGTAGAACAATGATTATTGCTTTTACTGGTGGACCTATGATGTTGCTTATTCTATTTTTACTTGGTGGTTTTATCCTTCCCAAACGTGACATTCCCAATTGGTGGGTATGGGGATACTGGATTTCACCTCTGGCATATGCTTTCAATGCATATTCTGCAAATGAAATGCTTGCTCCAAGGTGGAATCATCCAACTTCAGATGGTTCTCCCACAATTGGTGAAGCTGTATTAAACACCTTTGATGCTCCTAAACACGCATATTGGTATTGGATTGGTTTAGGAGCTCTTCTTGGTTTCACAGTTTTGTTCAATTTTCTCTTCACCCTTTCACTAATTTACCTTGATCCCATTGGAAAGAAACAAGGAATCATAGAAGATGAAAGTGAAATGGAGGTTGGGGGAGACTCTAGAGAAGAACCAAGACTCGCCACGAGGCCTGATCCTAGAAGAGAAGTGGCAATGCAGAGAATGATGAGCAGCCAAAGCGATGCTAGTGCTTCCGGAAACATTGAGTCAGCCACTGGAGTTGCCCCAAAGAGAGGAATGGTTCTACCTTTTCAACCACTTGCTATGTCTTTTGATAGTGTTAACTACTTTGTGGACATGCCACTAGAAATGAGAGACCAAGGAGCAACCGAAGATCGGCTGCAACTGCTTAGGGAGGTAACTGGTGCCTTTAGGCCAGGTGTTCTAACTGCTCTGATGGGAGTTAGTGGAGCTGGAAAAACAACTTTGATGGATGTCTTAGCCGGAAGAAAGACTGGTGGATATGTTGAAGGAGATATTCGAATCTCTGGATTCCCTAAGAATCAAGAAACCTTTGCTAGAATTTCTGGCTACTGTGAACAAACTGATATCCATTCACCTCAAGTTACTATCCATGAATCTTTGATTTACTCAGCCTTCCTTCGGTTACCTAAAGAAGTCAGTCATGACGAAAAGATGAAATTTGTGGAGGAAGTAATGGACTTGGTGGAGCTTAATAGTCTCAAGGATGCAATAGTTGGCCTTCCAGGAGTTACAGGGTTGTCAACTGAACAGAGAAAGAGGCTAACAATAGCAGTTGAACTTGTTGCTAATCCTTCAATCATTTTCATGGATGAGCCTACATCAGGTCTCGACGCAAGAGCGGCCGCCATTGTTATGCGAACCGTGAGAAACACAGTTGACACAGGAAGAACAGTTGTGTGCACAATTCACCAGCCTAGCATTGATATCTTTGAAGCCTTTGATGAGTTGCTATTGATGAAAAGAGGAGGACAAGTGATCTATGCAGGACCATTAGGAAGAAATTCCCACAAGATTATTGAATATTTTGAGGCAATTGAAGGGGTACCAAAGATTAAGGAAATGTATAACCCTGCAACATGGATGTTAGAAGTAAGCTCCATAGCAGCCGAAGTTCGCCTTGGAATGGACTTTGCTGATTACTACAAATCATCTTCCTTGTATCAGCGAAACAAAGCTCTTGTAAATGAGTTAAGCACACCTCCTCCCGGAGCAAATGATCTATACTTCCCAACTCAGTATTCTCAATCAACATGGGGGCAATTCACATCTTGTATATGGAAGCAGTGGATCACTTACTGGAGGAGTCCAGATTATAACCTTGTCAGATTCTTCTTCACATTGGTCACAGCTCTCATGGTGGGGACAATATTTTGGAGAGTTGGCACAAAAAGAAATTCATCTGGTGACTTGAGCAAGATTCTTGGAGCAATGTTTGGTGCTGTTATGTTTGTTGGTATCAACAACTGTCAAACCGTTCAGCCTGTAGTAGCCGTCGAAAGAACAGTGTTTTATAGAGAAAGAGCTGCTGGAATGTACTCAGCTTTGCCTTATGCCATTGCACAGATGCTTTGTGAAATACCATATGTGTTTGTTCAAACTTCATACTATGTAGTGCTAGTGTATGCTATGGTGAGCTTTGAATGGAAAGTAGAGAAGTTCTTTTGGTTCTTCTTCATCAGCTTCTTCTCCTTTTTGTACTTCACATATTATGGCATGATGACTGTTTCCATCACACCAAACCAACAAGTTGCATCAATCTTCGCCGCCGCGTTCTATGGAATCTTCAATCTCTTCTCTGGTTTCTTCATTCCTAGACCAAAAATTCCAAAATGGTGGGTATGGTACTATTGGATTTGCCCAGTGGCATGGACAGTGTATGGATTAATTGTGTCACAATATAGAGATGTAACAAAAGTAATCGATGTTGTTGGAACGGGGAAAAATGTTACTATTAAACAGTACATTGAAGACGAATATGGATTCAAGTCAGATTTTTTGGGGCCAGTTGCTGGAGTTTTAGTTGCCTTCACTCTCTTCTTTGCCTTTATATTTGCCTTCTGCATCAAAACATTGAACTTCCAAAACAGATAG 3642 0.4138 MTVKETFDFSARCQGVGTRYDLLAELARREKDAGIFPEAELDLFMKATAMEGMKSNLITDYTLKILGLDICKDTVVGDDMRRGISGGQRKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQVVHITEATILMSLLQPAPETFELFDDIFLIAEGQVVYEGPREHIVEFFESCGFRCPERKGTADFLQEVTSKKDQEQYWADKHRPYRYVTVTEFANKFKQFHVGMQLERELAVPFDKSAGHRAALVFKKYTVPRMKLLKACWDKEWLLIKRNAFVYIFKTGQIVILSIISATVFLRTHMHQRNVSDGTLYIGGILFTLIMNMFNGFAELSLTIARLPTFYKHRDHLFHPTWAYTLPNFLLRLPISIVETVVWVGITYYTIGFAPEASRFFKHLLLTFVVQQMAAGLFRLISGVCRTMIIAFTGGPMMLLILFLLGGFILPKRDIPNWWVWGYWISPLAYAFNAYSANEMLAPRWNHPTSDGSPTIGEAVLNTFDAPKHAYWYWIGLGALLGFTVLFNFLFTLSLIYLDPIGKKQGIIEDESEMEVGGDSREEPRLATRPDPRREVAMQRMMSSQSDASASGNIESATGVAPKRGMVLPFQPLAMSFDSVNYFVDMPLEMRDQGATEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVEGDIRISGFPKNQETFARISGYCEQTDIHSPQVTIHESLIYSAFLRLPKEVSHDEKMKFVEEVMDLVELNSLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPLGRNSHKIIEYFEAIEGVPKIKEMYNPATWMLEVSSIAAEVRLGMDFADYYKSSSLYQRNKALVNELSTPPPGANDLYFPTQYSQSTWGQFTSCIWKQWITYWRSPDYNLVRFFFTLVTALMVGTIFWRVGTKRNSSGDLSKILGAMFGAVMFVGINNCQTVQPVVAVERTVFYRERAAGMYSALPYAIAQMLCEIPYVFVQTSYYVVLVYAMVSFEWKVEKFFWFFFISFFSFLYFTYYGMMTVSITPNQQVASIFAAAFYGIFNLFSGFFIPRPKIPKWWVWYYWICPVAWTVYGLIVSQYRDVTKVIDVVGTGKNVTIKQYIEDEYGFKSDFLGPVAGVLVAFTLFFAFIFAFCIKTLNFQNR 1213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00190 1213 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 1 1213 - -
Aip08g00190 1213 Gene3D - 624 859 IPR027417 -
Aip08g00190 1213 Pfam ABC transporter 639 791 IPR003439 GO:0005524
Aip08g00190 1213 MobiDBLite consensus disorder prediction 548 567 - -
Aip08g00190 1213 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 200 IPR027417 -
Aip08g00190 1213 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 624 864 IPR003439 GO:0005524
Aip08g00190 1213 Gene3D - 1 227 IPR027417 -
Aip08g00190 1213 Pfam ABC-2 type transporter 937 1150 IPR013525 GO:0016020|GO:0140359
Aip08g00190 1213 Pfam ABC-2 type transporter 264 475 IPR013525 GO:0016020|GO:0140359
Aip08g00190 1213 PANTHER ATP-BINDING CASSETTE TRANSPORTER 1 1213 - -
Aip08g00190 1213 SMART AAA_5 648 840 IPR003593 -
Aip08g00190 1213 Pfam ABC-2 type transporter 143 216 IPR043926 GO:0140359
Aip08g00190 1213 Pfam ABC-2 type transporter 820 880 IPR043926 GO:0140359
Aip08g00190 1213 CDD ABCG_PDR_domain2 608 846 IPR034003 -
Aip08g00190 1213 Pfam Plant PDR ABC transporter associated 481 544 IPR013581 -
Aip08g00190 1213 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 624 847 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00190 Aip-Chr8 1293768 1300016 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00190 K08711 - gmx:100798588 1980.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00190 08 1293768 1300016 Aip08g00190 08 1293768 1300016 ECH
Aip08g00190 08 1293768 1300016 Aip09g00457 09 4788910 4797850 PCT