Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00143 ATGTTCAAGTTCTTAAAGAAGCCCATGGGAAACTCAAACTCAAAATCAAGCTTCTACACCTACCTGCTCCGAAAGCCACGTCACGATCATAATCAAAACCCCGTGGCTTATCTCCGGCGGTGGCACGTGACATGCACGGTGGGTTTCCTTCTCTTCCTGACCACCACCTACGTGTTGTGGCCGTCGGATCCGGCACTGAAGATCGTAGGGCTGAAGCTGAAGCGGATCAAGGTGCATCCCTTGCCGCATATCACCGTAGACATCTCCATGCTCCTCACCGTGAGAGTGCACAACGCCGGCGTGTACTCCCTCGATTTCGGAGGGGTTGACGTGGCGGTGTCTTACAGAGGGAGGAGGCTGGGGCACGTGATATCGGAGCACGGTCACGTGAGTGCCAGGGGATCGTCCTACGTGGACGCTGACGTGGAATTCGCGGGAATCGCGGTGGTGCCTGAGATGATGCTGTTTCTAGAAGACCTTGCAAAGGGTGCAATTCCCTTCTTTACGGTTTCTCAGGTCAACGGTCAAATGGGCCTTGCCTTCTTTCACTTCCCCATTCAGGCAAAACTATCATGTGAAGTATTGGTGAGTACAGTAAACCAGACAATTATTCACCAACATTGTCTCCATGAGTGA 636 0.5267 MFKFLKKPMGNSNSKSSFYTYLLRKPRHDHNQNPVAYLRRWHVTCTVGFLLFLTTTYVLWPSDPALKIVGLKLKRIKVHPLPHITVDISMLLTVRVHNAGVYSLDFGGVDVAVSYRGRRLGHVISEHGHVSARGSSYVDADVEFAGIAVVPEMMLFLEDLAKGAIPFFTVSQVNGQMGLAFFHFPIQAKLSCEVLVSTVNQTIIHQHCLHE 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00143 211 Pfam Late embryogenesis abundant protein 93 191 IPR004864 -
Aip08g00143 211 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 15 210 - -
Aip08g00143 211 Gene3D - 61 196 - -
Aip08g00143 211 PANTHER EXPRESSED PROTEIN 15 210 - -
Aip08g00143 211 SUPERFAMILY LEA14-like 49 159 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00143 - - gmx:100792375 277.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00143 08 925805 927067 Aip08g00143 08 925805 927067 ECH
Aip08g00143 08 925805 927067 Aip09g00327 09 3124026 3125527 PCT