Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00089 ATGGAAGGGATAACGGAGGGAGTTAACAACATCAACATCTCTGATTCGTACAAGAAGAATCGCATTCAGGTTTCGAACACAAAGAAGCCTCTCTTCTTCTACGTGAATCTCGCCAAGAGGTACATGCAACAGCATAATGAGGTCGAGCTCTCAGCACTCGGGATGGCTATTGCCACGGTGGTTACTGTTGCTGAGATATTGAAAAATAACGGCCTTGCTGTTGAAAAGAAAATCATGACATCAACCGTAGACATAAAGGATGATTCTAGAGGTAGACCTGTCCAAAAGGCCAAGGTAATGGTACAAATGCAGTTTTGTTTTACTCTAGAATGTTTGCCTTAG 342 0.4269 MEGITEGVNNINISDSYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLAVEKKIMTSTVDIKDDSRGRPVQKAKVMVQMQFCFTLECLP 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00089 113 Gene3D - 18 107 IPR036882 GO:0003676
Aip08g00089 113 PANTHER - 1 101 - -
Aip08g00089 113 SUPERFAMILY AlbA-like 19 102 IPR036882 GO:0003676
Aip08g00089 113 Pfam Alba 20 76 IPR002775 GO:0003676
Aip08g00089 113 PANTHER DNA/RNA-BINDING PROTEIN ALBA 3 1 101 IPR014560 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00089 Aip-Chr8 521064 522662 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00089 - - lang:109351177 186.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00089 08 521064 522662 Aip08g00089 08 521064 522662 ECH
Aip08g00089 08 521064 522662 Aip09g00244 09 2209291 2210883 PCT