Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03470 ATGTTGTCTAGAAAGGCTAGTAAGGACTCTCATGGCCAAGACTCTTCTTATTTTCAAGGATGGCAAGAGTATGAGAAAAACCCTTATCATCCCATTCAAAATCCAATGGGAATCATTCAGATGGGACTTGCAGAAAATCAGCTTTCATTTGACCTTCTTGAATCTTGGCTACGAAGAAATTCTAATACAATGGCGTTGAAGAAAGATGGGGTTTCTGCATTTAAAGATCTTGCTTTGTTTCAGGATTACCATGGTTTGCCAGCTTTCAAAGAAGCGTTAGTGAACTTTATGACAAGCATGAGAGGAAACAAAATCAAATATAGTTCAGACAAGCTTGTCCTCACAGCTGGTGCAACCGCAGCAAATGAAATTCTCATGTTTTGTCTCACTGACCCTGGCCAAGCCTTCATCCTCCCCACACCCTATTATCCTGGGTTTGATAGAGATCTGAAATGGCGAACGGGGGCTGAGATTATTCCAATGCATTGCTCAAGCTCAAACGGTTTTAGAATCACTCGTTGCGCCTTAGAACAAGCCTATCAGTTAGGCCAAGAACTGAACCTCAAGATCAAAGGAGTGCTAGTGACTAACCCCTCAAATCCACTAGGCACCACAATGACCAAAACAGAACTGAACCACTTGCTCGATTTCGCAATCGACAAGAACATTCACATTGTAAGCGACGAAATCTATTCAGGCACCGTCTTCGACTCCTCCTCCACCACCAGTTTCACAAGCATCATGGAAGTGCTGAACGAGAGAAACAACAATAATTATAATAACATTAGGAACCATGTTCACATGGTGTATAGTCTCTCAAAGGACCTAGGTCTCCCTGGATTTAGAGTAGGAATGATTTACTCAAACAATGAAAAGGTTATCGCCGCAGCCACAAAAATGTCAAGCTTTGCACTTGTTTCGTCACAAACTCAATTCTTGCTTTCAAACTTACTCTCCGACGCTAAGTTCATTAAGAAATACATGGTGGAGAACCAGAGGAGGTTGAAGAGGCGCAAGGACATGCTTGTGCGTGGATTAAGGAAAGCAGGGATATCGTGTTTAAGGAGCAATGCTGGATTGTTCTGTTGGGTGGACATGAGGCACTTGTTGAGTTCAGATTCGTTTGAAGCGGAGAAGGAACTTTGGAAGAGGATTGTGTGTGAGGTTGGTTTGAACATATCACCAGGGTCTTCTTGCCATTGCTCTCAGCCAGGGTGGTTTAGAATTTGTTTTGCTAACATCTCCGAAGATGCATTGCACCTTGCCATGCACAGGATGAAGGCCTTCACAAACTCAATCTTCTCTGTTCGACTTCCCATCATCATGATGAGAAAGAAATCATTTTAA 1347 0.4276 MLSRKASKDSHGQDSSYFQGWQEYEKNPYHPIQNPMGIIQMGLAENQLSFDLLESWLRRNSNTMALKKDGVSAFKDLALFQDYHGLPAFKEALVNFMTSMRGNKIKYSSDKLVLTAGATAANEILMFCLTDPGQAFILPTPYYPGFDRDLKWRTGAEIIPMHCSSSNGFRITRCALEQAYQLGQELNLKIKGVLVTNPSNPLGTTMTKTELNHLLDFAIDKNIHIVSDEIYSGTVFDSSSTTSFTSIMEVLNERNNNNYNNIRNHVHMVYSLSKDLGLPGFRVGMIYSNNEKVIAAATKMSSFALVSSQTQFLLSNLLSDAKFIKKYMVENQRRLKRRKDMLVRGLRKAGISCLRSNAGLFCWVDMRHLLSSDSFEAEKELWKRIVCEVGLNISPGSSCHCSQPGWFRICFANISEDALHLAMHRMKAFTNSIFSVRLPIIMMRKKSF 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03470 448 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 41 67 - -
Aip07g03470 448 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 74 90 - -
Aip07g03470 448 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 111 131 - -
Aip07g03470 448 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 133 154 - -
Aip07g03470 448 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 187 211 - -
Aip07g03470 448 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 223 246 - -
Aip07g03470 448 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 265 289 - -
Aip07g03470 448 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 297 320 - -
Aip07g03470 448 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 1 436 - -
Aip07g03470 448 Pfam Aminotransferase class I and II 39 425 IPR004839 GO:0009058|GO:0030170
Aip07g03470 448 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 271 284 IPR004838 GO:0003824|GO:0009058|GO:0030170
Aip07g03470 448 SUPERFAMILY PLP-dependent transferases 1 429 IPR015424 -
Aip07g03470 448 CDD AAT_like 80 428 - -
Aip07g03470 448 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 11 1 436 - -
Aip07g03470 448 Gene3D Aspartate Aminotransferase, domain 1 27 425 IPR015422 GO:0003824
Aip07g03470 448 Gene3D - 61 320 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03470 Aip-Chr7 124587824 124590165 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03470 K01762 - gmx:100803507 667.922