Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03467 ATGATTCGAAGAGCTCTATGCTTCCCCAGTTTCATCAGGAAATCGCTGCTTATTCCACCCGTTATTTCTCCTTATTCTAATTCTTCCTCCAAGATCGGAGCTTACAATGGGTATGCATCTCAGACGTCTTCTCTTGAAGTTCCGGACTCGGCACCTTACAGGGAAAATGATGAGTATGCTGATGTGGACTGGGATAACCTTGGATTTGGACTAATGCCAACTGATTACATGTATGTAAACAAATGTGGTGCGGGGCAGCATTTTGGACATGGACAACTCAATCCTTATGGCAACATTCACCTTAGCCCATCAGCTGCTGTCTTAAATTATGGCCAGGGGTTATTCGAAGGCACGAAAGCATACAGAAAAGAGAACGGGCAGCTGCTTCTGTTCCGTCCAGAACAAAATGCCATTCGGATGAAGAGTGGCGCACAAAGAATGTGCATGGAAGCCCCTTCCGTTGACCAATTTGTCAACGCTTTGAAACAAACTGCTTTGGCTAATAAGCGCTGGGTTCCTCCTCCGGGGAAAGGATCGTTGTACCTTAGGCCTCTGCTTATAGGAAGCGGTGCGGTTTTGGGTTTGGCTCCAGCACCTGAATACACTTTCCTCATATATGCTTCCCCTGTCCGCAACTATTTCAAAGTCATTCATCAACTCTACTACTTCTTAGTTCTTACAATTACTTCAATATTCCGAATAAAATTTTATATGTATGTATTAATATTGGTTGAGCAGGAGGGCTCTGCACCACTCAACTTGTACGTGGAGGAGAATTTTGATCGTGCTTCTCGCCGCGGCACCGGCAGCGTTAAAACCATTTCTAATTATGCCCCTGTATTGATGGCGCAACTTAGAGCCAAGAAGAATGGATTTTCGGATGTGTTGTATCTGGACTCAGCCACCAAGAAGAATCTAGAGGAGGTTTCTTCTTGTAACATTTTTATTGCCAAGGGAAGATGCATCTCAACACCTGGTACTAATGGAACCATTCTTGCTGGAATCACGAGAAAAAGCGTCATTGAACTTGCCCGTGATCACGGCTATGAGGTACAAGAGCGTGCTGTAGCTGTGGATGAATTAATGGAGGCTGATGAGGTTTTCTGCACGGGAACTGCTGTTGGTGTTGCTCCAGTCGGAGCCATCACATACCAAAATACAAGGATGGAATATAAAACGGGCTCTGGAACTATTTGTCAAGAGCTGTATAATACCCTTTTGGGAATTCAAACGGGTGCTATTGAAGATAAGAAGGGATGGATCATTGAAATTGGGTGA 1278 0.446 MIRRALCFPSFIRKSLLIPPVISPYSNSSSKIGAYNGYASQTSSLEVPDSAPYRENDEYADVDWDNLGFGLMPTDYMYVNKCGAGQHFGHGQLNPYGNIHLSPSAAVLNYGQGLFEGTKAYRKENGQLLLFRPEQNAIRMKSGAQRMCMEAPSVDQFVNALKQTALANKRWVPPPGKGSLYLRPLLIGSGAVLGLAPAPEYTFLIYASPVRNYFKVIHQLYYFLVLTITSIFRIKFYMYVLILVEQEGSAPLNLYVEENFDRASRRGTGSVKTISNYAPVLMAQLRAKKNGFSDVLYLDSATKKNLEEVSSCNIFIAKGRCISTPGTNGTILAGITRKSVIELARDHGYEVQERAVAVDELMEADEVFCTGTAVGVAPVGAITYQNTRMEYKTGSGTICQELYNTLLGIQTGAIEDKKGWIIEIG 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03467 425 ProSitePatterns Aminotransferases class-IV signature. 308 337 IPR018300 GO:0003824
Aip07g03467 425 Gene3D - 37 221 IPR043131 -
Aip07g03467 425 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 88 410 IPR036038 GO:0003824
Aip07g03467 425 CDD BCAT_beta_family 100 412 IPR033939 GO:0004084|GO:0009081
Aip07g03467 425 PANTHER AMINO ACID AMINOTRANSFERASE 246 424 IPR005786 GO:0004084|GO:0009081
Aip07g03467 425 PANTHER AMINO ACID AMINOTRANSFERASE 27 216 IPR005786 GO:0004084|GO:0009081
Aip07g03467 425 PANTHER BRANCHED-CHAIN-AMINO-ACID AMINOTRANSFERASE 27 216 - -
Aip07g03467 425 PANTHER BRANCHED-CHAIN-AMINO-ACID AMINOTRANSFERASE 246 424 - -
Aip07g03467 425 PIRSF BCAT1 40 234 IPR005786 GO:0004084|GO:0009081
Aip07g03467 425 PIRSF BCAT1 226 425 IPR005786 GO:0004084|GO:0009081
Aip07g03467 425 Gene3D - 248 424 IPR043132 -
Aip07g03467 425 Pfam Amino-transferase class IV 113 382 IPR001544 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03467 Aip-Chr7 124553399 124557966 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03467 K00826 - gmx:100782644 611.683