Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03423 ATGGATTCTTCACAATCACAACAAGGGTCTAAGCTGGCTGGTTTGGTGGAGAATGCATCGATTCAGAGGGATGGATCTCGATTGGGTCATGGCGTCCCTATCTATGTTAAGGAGCTCATCGCCGGTGGCTTCGCCGGTGCGATTTCTAAGACCACCGTTGCACCCCTCGAACGGGTCAAGATTCTCTGGCAGACAAGGACAGCAGGATTTCATACTCTGGGTGTGTATCAATCATTGAAAAGGTTATCAAAGCATGAAGGATTTCTAGGACTATATAAAGGAAATGGAGCTAGCGTTATCCGGATTGTTCCATATGCAGCCTTGCATTTTATGACATATGAGCGATATAAAAGCTGGATCTTGAGCAATTATCCTATGTTAGGATCAGGTCCTATTGTTGATCTCTTAGCTGGTTCCGCAGCAGGAGGAACTTCAGTAATATGTACATATCCCTTAGATCTTGCCCGCACCAAACTCGCTTATCGGGTGGTAGAGAAAAAAGGCAGTTTCAAAGATGGTGTGAAAGGAGGTCATTCTCAAACTGGTCACAACAGCATTAAAAGTGTTCTTACAAGTGTCTACAGGGAAGGGGGAGTTCGTGGACTTTATAGAGGTGCAGGACCAACTATTACTGGAATACTTCCATATGCTGGTTTAAAGTTCTACACGTATGAGACATTGAAATTGCATGTTCCTGAAGAACATCAAAAGTCCATTTTGATGCGCCTCTCTTGCGGAGCCTTAGCTGGGTTATTTGGCCAGACCTTAACATACCCTTTAGATGTTGTTAAGAGACAAATGCAGGTTGGTAACTTGGAAAATGCAGCTCATGAAAATGCCAGATACCGAAATACATTCCATGGACTAAGAACAATTGTTCAAAACCAAGGGTGGAGACAGTTGTTTGCAGGTGTAAGCATCAACTATATAAGGGTATGCGAGCTTTGA 948 0.4357 MDSSQSQQGSKLAGLVENASIQRDGSRLGHGVPIYVKELIAGGFAGAISKTTVAPLERVKILWQTRTAGFHTLGVYQSLKRLSKHEGFLGLYKGNGASVIRIVPYAALHFMTYERYKSWILSNYPMLGSGPIVDLLAGSAAGGTSVICTYPLDLARTKLAYRVVEKKGSFKDGVKGGHSQTGHNSIKSVLTSVYREGGVRGLYRGAGPTITGILPYAGLKFYTYETLKLHVPEEHQKSILMRLSCGALAGLFGQTLTYPLDVVKRQMQVGNLENAAHENARYRNTFHGLRTIVQNQGWRQLFAGVSINYIRVCEL 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03423 315 PRINTS Mitochondrial carrier protein signature 246 268 IPR002067 GO:0055085
Aip07g03423 315 PRINTS Mitochondrial carrier protein signature 94 114 IPR002067 GO:0055085
Aip07g03423 315 PRINTS Mitochondrial carrier protein signature 203 221 IPR002067 GO:0055085
Aip07g03423 315 PRINTS Mitochondrial carrier protein signature 38 51 IPR002067 GO:0055085
Aip07g03423 315 PRINTS Mitochondrial carrier protein signature 144 162 IPR002067 GO:0055085
Aip07g03423 315 PRINTS Mitochondrial carrier protein signature 51 65 IPR002067 GO:0055085
Aip07g03423 315 PANTHER GRAVES DISEASE MITOCHONDRIAL SOLUTE CARRIER PROTEIN-LIKE 23 312 - -
Aip07g03423 315 Pfam Mitochondrial carrier protein 237 312 IPR018108 -
Aip07g03423 315 Pfam Mitochondrial carrier protein 35 122 IPR018108 -
Aip07g03423 315 Pfam Mitochondrial carrier protein 131 231 IPR018108 -
Aip07g03423 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 129 230 IPR018108 -
Aip07g03423 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 237 315 IPR018108 -
Aip07g03423 315 SUPERFAMILY Mitochondrial carrier 36 313 IPR023395 -
Aip07g03423 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 33 119 IPR018108 -
Aip07g03423 315 PANTHER SOLUTE CARRIER FAMILY 25 23 312 - -
Aip07g03423 315 Gene3D Mitochondrial carrier domain 34 314 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03423 Aip-Chr7 124010532 124013754 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03423 32 312 Organic Solute Cotransporters AT4G26180 56.028 1.83e-110 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03423 - - lang:109343818 507.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03423 07 124010532 124013754 Aip07g03423 07 124010532 124013754 ECH