Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03406 ATGGGTCGTGTTCCGACGAAGCAGCAGAAGAATAACAGATCGAAGGATGGCGGCGATGGAACTCAAGAAAAGCAGAAACCGAGTCTGAAGGGGGCAGAGAGGTCGGCGTACTTCGCTCGGAGAGAGGCGGCGAAGGTTCTCAGAGTGGTTCTGCAGGGCGACGCCAACCGCCGTGCACTGGCCTCCATCAAATCCCTCATCTACAAACCCTCCGTCAGGAACAAGAAGGCCACTTTCGCCCTCATTTGTCAGACTCTCAAACGTAACCGTTTCTCACATTTGCTTCACATTCTTCACACTCTTTCTCTCNNNNNNNNNNNNNNNNNNNNNNNNNCCAAGTGGAAGAGACAACAAGAATTGGTTTACATCATTGTGTATGATATTCTTTTCGGCCAGGCAGTTGCAGTGGCTGGTGATGCAGAGAAGTATCTCATGCGACATAAGAACGCACTACAATCCACTTTGAAACAGCTTTTGTTACGGAGAAATGTGAAGAACGTTGAACAGTTGATTGCTCTGAATCAGCTTCCTGATGTTTCCCTGCCTCGTTATGTTCGCGTCAATACGCTCAAGCTGGATGTCGATTCTGCCTTACTTGAGCTTAAGGAAAAGTACTCGGTTGAAAAAGATGATTTACTGCCTGACTTGCTGATACTCCCACCGGGCACTGATTTGCATGATCATCCCCTTGTCAACAATGGAAGTATCTTTATGCAAGGTAAGGCGAGTTCCATGGTAGCACCGGCCCTCAACCCTGAACCAGGATGGGAGGTTATTGATGCATGTGCTGCTCCAGGAAACAAAACTGTCCACCTAGCCGCCCTTATGAAGAGGAAGGGTAGGATTATAGCATGTGAACTGAATAAACAAAGGATTAAGCGTTTGAAAGAGACTATCAAACTATCCGGGGCTTCTAACATACATGTTCTCAATGAGGATTTCTTGAACATAGATCCCAAGGCACCTTCATATTCTAAGGTGAAGGCTATTCTTTTGGATCCTTCCTGTTCTGGTTCTGGTACTGCTGCTTCAAGATTAGACCATCTGCTCCCATCTAAAGCAGCAGGTCAGGATACCGATATGGAAAGATTGAACAAGCTTGCAGCTTTCCAGAGAAAGGCTCTGCAGCATGCTTTAAGCTTTCCAGCAGTTGAAAAAATTGTGTATAGCACATGTTCAATCAACCAAATTGAGAATGAAGATGTCATCAAATCTGTTCTTCCCATTGCCGAATCACATGGATTTGAACTTGTGAATCCCTTCGCTGAATGGCACTGTCGTGGCCTACCTGTGTTTAAAGGCTCTGAAAACTTGGTTCGGACAGATCCTGCCGCAGACGGCGAGGGCTTCTTCATTGCTCTGTTTGCCAAGAAGAAAAATGTGCAAAAGAAGAAGAAACACTTCTTTCCCCGCATTCATACTGATCCTTTCAGAACCTGGTTGTATTACCGGCTCAACGGCCCTTGA 1467 0.4554 MGRVPTKQQKNNRSKDGGDGTQEKQKPSLKGAERSAYFARREAAKVLRVVLQGDANRRALASIKSLIYKPSVRNKKATFALICQTLKRNRFSHLLHILHTLSLXXXXXXXXXKWKRQQELVYIIVYDILFGQAVAVAGDAEKYLMRHKNALQSTLKQLLLRRNVKNVEQLIALNQLPDVSLPRYVRVNTLKLDVDSALLELKEKYSVEKDDLLPDLLILPPGTDLHDHPLVNNGSIFMQGKASSMVAPALNPEPGWEVIDACAAPGNKTVHLAALMKRKGRIIACELNKQRIKRLKETIKLSGASNIHVLNEDFLNIDPKAPSYSKVKAILLDPSCSGSGTAASRLDHLLPSKAAGQDTDMERLNKLAAFQRKALQHALSFPAVEKIVYSTCSINQIENEDVIKSVLPIAESHGFELVNPFAEWHCRGLPVFKGSENLVRTDPAADGEGFFIALFAKKKNVQKKKKHFFPRIHTDPFRTWLYYRLNGP 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03406 488 ProSiteProfiles SAM-dependent MTase RsmB/NOP-type domain profile. 173 458 IPR001678 GO:0008168
Aip07g03406 488 MobiDBLite consensus disorder prediction 1 31 - -
Aip07g03406 488 CDD AdoMet_MTases 258 346 - -
Aip07g03406 488 Gene3D Vaccinia Virus protein VP39 239 465 IPR029063 -
Aip07g03406 488 PANTHER BNAA09G04380D PROTEIN 25 462 - -
Aip07g03406 488 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 181 458 IPR029063 -
Aip07g03406 488 MobiDBLite consensus disorder prediction 9 31 - -
Aip07g03406 488 Pfam 16S rRNA methyltransferase RsmB/F 249 455 IPR001678 GO:0008168
Aip07g03406 488 Gene3D Sun protein; domain 3 174 238 - -
Aip07g03406 488 PRINTS RNA (C5-cytosine) methyltransferase signature 259 269 IPR023267 GO:0001510
Aip07g03406 488 PRINTS RNA (C5-cytosine) methyltransferase signature 328 340 IPR023267 GO:0001510
Aip07g03406 488 PRINTS RNA (C5-cytosine) methyltransferase signature 384 400 IPR023267 GO:0001510
Aip07g03406 488 PRINTS RNA (C5-cytosine) methyltransferase signature 440 457 IPR023267 GO:0001510
Aip07g03406 488 PANTHER NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 25 462 IPR023267 GO:0001510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03406 K15264 - gmx:100775620 692.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03406 07 123800202 123803416 Aip07g03406 07 123800202 123803416 ECH