Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03405 ATGGATTTCAGGTTGATGGGACTCGATTCTCCATTGCTGAGCACCATTCACCACATGATGGATATGAGCGACGACAATGCCGACGCCAAGAACATCAACGCTCCCACAAGGACCTACGTGCGTGACGCGAAGGCGATGGCGGCTACTCCGGCCGACGTGAAGGAGTATCCTCAGTCGTACGTGTTCGTGATCGACATGCCGGGACTGAAGTCCGGTGACATTAAGGTTCAGGTGGAGGACGACAACGTTCTGATCATCAGCGGCGAGAGGAAGAGGGACGAAGAGAAAGAAGGTGCTAAGTATTTGAGGATGGAGAGGAGGGTTGGAAAATTCATGCGCAAGTTTGTGTTACCGGAGAATGCAAACACTGATGCTATTTCTGCTGTGTGTCAAGACGGAGTTCTCACCGTCACCGTTCAGAAGCTTCCTCCTCCTGAGCCTAAGAAGCCTAAGACTATTGAGGTTAAGATTGCTTGA 477 0.5115 MDFRLMGLDSPLLSTIHHMMDMSDDNADAKNINAPTRTYVRDAKAMAATPADVKEYPQSYVFVIDMPGLKSGDIKVQVEDDNVLIISGERKRDEEKEGAKYLRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPEPKKPKTIEVKIA 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03405 158 SUPERFAMILY HSP20-like chaperones 28 150 IPR008978 -
Aip07g03405 158 Pfam Hsp20/alpha crystallin family 52 156 IPR002068 -
Aip07g03405 158 PANTHER 18.0 KDA CLASS II HEAT SHOCK PROTEIN 8 157 - -
Aip07g03405 158 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 42 158 IPR002068 -
Aip07g03405 158 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 8 157 - -
Aip07g03405 158 Gene3D - 9 157 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03405 Aip-Chr7 123798817 123799789 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03405 K13993 - pop:7462237 270.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03405 07 123798817 123799789 Aip07g03405 07 123798817 123799789 ECH