Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03398 ATGTCAAGCACATTGATGAACGGTGGTGTTGAAGCTGCTGCTGGTAGTGGTGGTGGTGGTGTTAGAGACTTGTATGGTGAAGACAGAGCCACGGAGGATCAGCTTATCACCCCTTGGTCCTTCTCTGTCTCAAGTGGCTGCACTTTGCTGCGCGATCCGCGCTACAACAAAGGCCTCGCCTTCACCGAGAGAGAAAGAGATGCTCATTACCTGCGAGGCCTTTTGCCACCAGCAGTATTCAATCAAGAACTTCAGGAGAAGAGGTTGATGCATAACCTTCGCCAGTATGAAGTTCCTCTGCATAGGTACATGGCCATGATGGATCTTCAGGAGAGGAATGAGAGGCTGTTTTACAAGATTCTGATTGATAACGTTGAGGAACTGCTTCCTGTTGTTTACACTCCAACAGTGGGAGAAGCCTGCCAGAAATATGGAAGCATTTTCCGTCGTCCGCAGGGTCTATACATCAGCTTGAAAGAGAAAGGTAAGATCCTTGAAGTACTGAAAAACTGGCCAGAGAAGAACATTCAAGTTATTGTTGTCACTGATGGCGAGCGTATATTAGGACTCGGAGATCTTGGCTGCCAGGGAATGGGGATTCCTGTTGGGAAGCTTTCGCTCTATACTGCATTGGGAGGGGTTCGCCCTTCATCATGCTTGCCTATAACCATTGATGTTGGCACAAACAATGAGAAGTTGCTGAATGATGAGTTTTACATTGGTCTCAGACAAAAGCGTGCAACTGGGAAGGAATATGCTGAGCTTCTAGATGAGTTCATGCGCGCTGTTAAGCAGAACTATGGGGAGAAAGTTCTTATTCAGTTTGAAGACTTCGCGAATCATAATGCGTTCGATCTGCTTGCAAAATACAGTTCATCTCATCTTGTTTTCAATGATGATATTCAGGGTACAGCATCTGTGGTATTAGCAGGATTGCTTGCTTCTTTAAAATTAGTTAGGGGAACCTTAGCTGATCATACCTTCTTATTTTTGGGTGCTGGAGAGGCTGGAACTGGTATTGCAGAGTTGATAGCACTTGAAATATCAAAACAGACAAAAGCTCCAGTGGAAGAAACCCGCAAGAAGATTTGGCTTGTCGACTCCAAGGGTCTTATTGTTAGCTCTCGCCTCGGATCGCTTCAGCACTTCAAAAAGCCTTGGGCACATGAGCATGAACCTGTAAAGGAGCTTGTTGGTGCTATCAAGGCAATCAAGCCAACAGTATTGATTGGATCATCTGGAGTAGGGAAGACATTTACCAAAGAAGTGATTGAAGCCATGGCATCATTGAATAAGAAACCGCTCATTCTTGCTCTCTCCAATCCAACATCTCAATCTGAGTGCACTGCTGAAGAAGCTTATACATGGAGCAAGGGTCAAGCAATCTTTGCTAGTGGTAGCCCATTTGATCATGTTGAATATGAAGGAAAAGTCTTTGTTCCTGGACAGGCCAACAATGCTTACATATTCCCTGGTTTCGGCTTGGGTTTGATCATCTCCGGTGCAATCCGCGTACGCGATGAGATGCTCTTGGCAGCCTCTGAAGCTTTGGCTGCACAAGTGTCACAGGAGAACTATGATAAAGGACTGATTTACCCTCCATTCTCAAATATCAGAAAGATATCAGCACATATTGCTGCTAATGTGGCAGCCAAGGCATATGAACTTGGTCTTGCTTCTCATCTACCTCGACCTAAGGATCTTGTCAAATATGCAGAAAGTTGCATGTACAGCCCAGGCTACAGAAACTACCGTTGA 1758 0.4528 MSSTLMNGGVEAAAGSGGGGVRDLYGEDRATEDQLITPWSFSVSSGCTLLRDPRYNKGLAFTERERDAHYLRGLLPPAVFNQELQEKRLMHNLRQYEVPLHRYMAMMDLQERNERLFYKILIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPEKNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSSCLPITIDVGTNNEKLLNDEFYIGLRQKRATGKEYAELLDEFMRAVKQNYGEKVLIQFEDFANHNAFDLLAKYSSSHLVFNDDIQGTASVVLAGLLASLKLVRGTLADHTFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIWLVDSKGLIVSSRLGSLQHFKKPWAHEHEPVKELVGAIKAIKPTVLIGSSGVGKTFTKEVIEAMASLNKKPLILALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDHVEYEGKVFVPGQANNAYIFPGFGLGLIISGAIRVRDEMLLAASEALAAQVSQENYDKGLIYPPFSNIRKISAHIAANVAAKAYELGLASHLPRPKDLVKYAESCMYSPGYRNYR 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03398 585 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 26 300 IPR046346 -
Aip07g03398 585 SMART Malic_M_2 301 554 IPR012302 GO:0051287
Aip07g03398 585 PIRSF ME 21 585 IPR001891 GO:0004470|GO:0004471
Aip07g03398 585 Gene3D - 44 298 IPR037062 GO:0004471
Aip07g03398 585 SMART malic_2 110 291 IPR012301 GO:0004471
Aip07g03398 585 CDD NAD_bind_1_malic_enz 301 579 - -
Aip07g03398 585 Gene3D - 299 585 - -
Aip07g03398 585 PANTHER MALIC ENZYME 10 585 - -
Aip07g03398 585 PANTHER MALIC ENZYME-RELATED 10 585 - -
Aip07g03398 585 Pfam Malic enzyme, NAD binding domain 301 553 IPR012302 GO:0051287
Aip07g03398 585 ProSitePatterns Malic enzymes signature. 297 313 IPR015884 GO:0004471
Aip07g03398 585 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 301 584 IPR036291 -
Aip07g03398 585 Pfam Malic enzyme, N-terminal domain 110 290 IPR012301 GO:0004471
Aip07g03398 585 PRINTS Malic enzyme signature 297 313 IPR001891 GO:0004470|GO:0004471
Aip07g03398 585 PRINTS Malic enzyme signature 176 205 IPR001891 GO:0004470|GO:0004471
Aip07g03398 585 PRINTS Malic enzyme signature 212 234 IPR001891 GO:0004470|GO:0004471
Aip07g03398 585 PRINTS Malic enzyme signature 116 140 IPR001891 GO:0004470|GO:0004471
Aip07g03398 585 PRINTS Malic enzyme signature 431 447 IPR001891 GO:0004470|GO:0004471
Aip07g03398 585 PRINTS Malic enzyme signature 272 290 IPR001891 GO:0004470|GO:0004471
Aip07g03398 585 PRINTS Malic enzyme signature 328 344 IPR001891 GO:0004470|GO:0004471
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03398 Aip-Chr7 123730981 123735418 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03398 K00029 - gmx:100818219 1068.91