Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03397 ATGGATCTGGTGGATCAGGACCTTTTGTTGGAAGAAGATGAGGTGGAACAAGACTACACCTACTTTCTTCGTCAATATTTGGAAGAGCACCTCGAGGATGACGATGGTGATGGTGTTGTTCACTTAGCTGAACCATCTTTGCACACATATCTCGGTGAAATTGAAGACACTCGCCACAGAACAGCTTTCTTGGATGGTGATTCTGTTGTGAACCTTCCTCTGTTTCGCCTTCAAGGAGTTGTACGCTTTCCCGGGGCTACTCTTCCCCTAAGAGTTATTGAACCTCGTATGGTGGCTGCTGTTGAGAGAGCTCTAAGTCAGGTCGATGTTCCTTACACCATCGGCGTGATTCGAATTCACAGGGATACTGCAAATTGGAGGATGAAATCAGCTAGCATTGGGACAACTGCAGAGATTCGACAATATGGACGTCTACAGGATGGTTCGTTGAATGTGGTGACCCGCGGACAACAACGATTTCGCCTAAGAAGGTGTTGGAATGATGCAGATGGAGTGCCTTATGGAGAGATTGAAATTATCGAGGAAGGTCTACCATTGAAAACACCAAGGGATGTGTTTGGGGAATTAGGACCATCATCGGCCAGGAGCAGTGGTGATAAAGTCACAGGGAAGTCATATCAGGAAATTAGATCAAATCTAAATGAAGCTGAAACAAAGGATTCAAGAATTGATAGCTGTTCAACTTCCGGAAATCAGTCATGCATAGGAGAAGAGCTTAATGACTCTTTTGAAAATAGATATGCCTACCCATCAAATAAAATATCAACGGCATTCTGGCCTCACTGGGTATATCGTATGTTTGACTCCCATTCGCTTGCACAAAGGGCTGCAGATATGTGGAGGAAGATAATTGGCGTGCCTAGCATGGATAATCTCGTTAAGAAGCCTGATATTTTATCATTTTATATTGCTAGTAAAATACCTGTCTCTGAATCTACAAGGCAGGAGCTTTTGGACATTGATGGCATTGCATATAGATTGCGCAAGGAAATTGAATTACTAGAGAGTATTGATATTATCCAATGTAAAAGCTGCCAGACTATAATTGCAAAACGAAGTGATATGTTGGTGATGTCAAGTGAGGGCCCTCTTGGTGCTTATGTGAACCCCGGTGGTTATGTACATGAAATAATGACTCTTCACAAGGCAAATGGCTTAGACCTCGACGGGCCACCGGCTACAGAATATAGTTGGTTTCCTGGGTATGCATGGACGATCACTCGTTGTGCCTCATGCAGAACTCAAATGGGGTGGCTTTTTACAGCCACCACCAAGAAACTGAAACCTAGGTCGTTTTGGGGGATACGAAGTTGTCAAGTTGCATAA 1347 0.438 MDLVDQDLLLEEDEVEQDYTYFLRQYLEEHLEDDDGDGVVHLAEPSLHTYLGEIEDTRHRTAFLDGDSVVNLPLFRLQGVVRFPGATLPLRVIEPRMVAAVERALSQVDVPYTIGVIRIHRDTANWRMKSASIGTTAEIRQYGRLQDGSLNVVTRGQQRFRLRRCWNDADGVPYGEIEIIEEGLPLKTPRDVFGELGPSSARSSGDKVTGKSYQEIRSNLNEAETKDSRIDSCSTSGNQSCIGEELNDSFENRYAYPSNKISTAFWPHWVYRMFDSHSLAQRAADMWRKIIGVPSMDNLVKKPDILSFYIASKIPVSESTRQELLDIDGIAYRLRKEIELLESIDIIQCKSCQTIIAKRSDMLVMSSEGPLGAYVNPGGYVHEIMTLHKANGLDLDGPPATEYSWFPGYAWTITRCASCRTQMGWLFTATTKKLKPRSFWGIRSCQVA 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03397 448 Gene3D - 275 339 - -
Aip07g03397 448 Pfam ATP-dependent protease La (LON) substrate-binding domain 71 342 IPR003111 -
Aip07g03397 448 SUPERFAMILY PUA domain-like 71 342 IPR015947 -
Aip07g03397 448 Gene3D - 52 180 IPR046336 -
Aip07g03397 448 Gene3D Peptide methionine sulfoxide reductase. 340 448 - -
Aip07g03397 448 ProSiteProfiles Lon N-terminal domain profile. 72 343 IPR003111 -
Aip07g03397 448 CDD CRBN_C_like 347 443 IPR034750 -
Aip07g03397 448 PANTHER CEREBLON 44 446 - -
Aip07g03397 448 SMART lon_5 71 343 IPR003111 -
Aip07g03397 448 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 346 437 IPR004910 -
Aip07g03397 448 ProSiteProfiles CULT domain profile. 344 448 IPR034750 -
Aip07g03397 448 PANTHER PROTEIN CEREBLON 44 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03397 Aip-Chr7 123727687 123730886 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03397 K11793 - twl:119996613 495.352