Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03390 ATGGAAGTGGAGTCGGTTGTTGGTGCAAATTCAAATTCGAATGCTCTTCTGGACGATGATGGCAAAGCCAGAAGAACTGGGACGGTATGGAGTGCGAGTGCACACATCATAACAGCAGTGATCGGAGCCGGAGTGTTATCGTTAGCATGGGCGATGGCGCAATTAGGATGGATCTTAGGCACAGCATCTATCTTGATCTTTGCTGGAGTTACTCTTTTCACTTCTAATCTTCTAGCAGATTGTTATAGATCGCCTCACCCAGTTACTGGCAAGAGAAATCACACTTACATGGAAGCTGTAAAAGCTCACTTAGGAGGAAGAATGCATATGATTTGTGGATTGATCCAGTATAGCAATCTCGTTGGAATTGCAATTGGCTACACAATAACTACATCTATAAGTGTGGTGACAATTGTGAAGAACAATTGCATGAAGAAGCATAATGGGAGTGAAGCTGATTGCCATTTTTCAAATAATCCATCTATTATTGGCATTGCAATTGCTGAAATCTTCCTTTCTCAAATTCCTAATTTTCACAAGCTATCTTGGATCTCCTTCTTAGCAGCAATCATGTCTTTTGGATATGCCTTTATTGGCATTGGGCTTTCTCTTACAGTCATTATCCAAGGTTTGTTTCTCTATCTTTATTTAACTTTTATCcgaggtttagctaactaTTTAAAGTCAACACCAGCAGAAAACAAAGTGATGAAGATGGCAAATAGCATTGGAATAATTACAATGAGCATTATCTTCCTCTTATCTGGTGGTGCTGGATATGCAGCCTTTGGAGCAGACACTCCTGGGAGCATTCTCAACACCACTGGAAATGAACATGTGTGGCTTGTTTATATGGGTAATGTCTTCATTATTGTCCACATTCTTGGAGCATATCAGGTACTTATCCAACCATTTTATCACATAGTGGAATTATTGGTGAGTCAAAGGTGGGCAAGCTCAAACTTCATAAATAAGGAGTATTTTGTGGGAATTGGCAAAATTCAATTTAGCATCAATTTATTCAGGCTTATTTGGAGGACCATATTTGTGGTGGTTGCAAGTGTGTTAGCCATGGCAATGCCATTTTTTAATGACATGCTTGCCCTTCTTGGTGCAATTGGGTTTTGGCCTCTAGCTGTCTATTTCCCAATACAAATGATCATTGTCAAGAGAAATATAAGAAAAGGAACCATGCCATGGATTGGGCTTCAATCTTTGAGCCTTGTGTGCATGATTGTTTCAATTGCAGCAGCATGTGCTGCTATTCATGGGTTGGGCCAAGCCCTTGGTAAATACAAGCCCTTTATGTATAAGGCCTAG 1320 0.3962 MEVESVVGANSNSNALLDDDGKARRTGTVWSASAHIITAVIGAGVLSLAWAMAQLGWILGTASILIFAGVTLFTSNLLADCYRSPHPVTGKRNHTYMEAVKAHLGGRMHMICGLIQYSNLVGIAIGYTITTSISVVTIVKNNCMKKHNGSEADCHFSNNPSIIGIAIAEIFLSQIPNFHKLSWISFLAAIMSFGYAFIGIGLSLTVIIQGLFLYLYLTFIRGLANYLKSTPAENKVMKMANSIGIITMSIIFLLSGGAGYAAFGADTPGSILNTTGNEHVWLVYMGNVFIIVHILGAYQVLIQPFYHIVELLVSQRWASSNFINKEYFVGIGKIQFSINLFRLIWRTIFVVVASVLAMAMPFFNDMLALLGAIGFWPLAVYFPIQMIIVKRNIRKGTMPWIGLQSLSLVCMIVSIAAACAAIHGLGQALGKYKPFMYKA 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03390 439 Pfam Transmembrane amino acid transporter protein 214 422 IPR013057 -
Aip07g03390 439 Pfam Transmembrane amino acid transporter protein 25 207 IPR013057 -
Aip07g03390 439 PANTHER OS05G0424000 PROTEIN-RELATED 216 431 - -
Aip07g03390 439 PANTHER OS05G0424000 PROTEIN-RELATED 3 208 - -
Aip07g03390 439 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 216 431 - -
Aip07g03390 439 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 3 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03390 Aip-Chr7 123613599 123622347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03390 11 435 Organic Solute Cotransporters AT1G58360 47.059 1.49e-147 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03390 K24917 - twl:119997723 470.314